Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00123 ATGAACATGATGAACATCATGGTTAGTTGTCTCTGTCTTAGTGTAGTGGTGCCATTTTTAATGTCTGTGCAGTACACAGAGGCACAGAGAGTGTTCGTGGTTGGAGAAGGCACGGGTTGGACAACTCCCCAAGATTCCTCCACATACCAATCTTGGGCTTCTAACAACACTTTTGCAGTTGGAGATATTCTATCCTTCAATTTTCAGACAACACGACATAACGTGGTTGAAGTGTCGGAAGAATCATACACATCGTGCACTTCAACTAATCCTATAGGTACAGTCTATAACACAGGTCCGGTCAACGTTACACTTAACAGAACTGGTCAACATTACTACATCTGTAGCATTGGTCAACACTGTACAAGTGGACAGAAGTTAGCCATCAATGTTCTAGCCTCTGCTTTGCCACCTTCCACCGCCGCTCCACCGCCGCCACCACCGCCGCCTATGTCTCTTGCATCCACTTTTTCCCCTTCTTCCATTCCCTTCCTCTTCATATGCTCATTCATTTTTGTGTTTCTGGACATAATGCATGGACCATAG 546 0.4524 MNMMNIMVSCLCLSVVVPFLMSVQYTEAQRVFVVGEGTGWTTPQDSSTYQSWASNNTFAVGDILSFNFQTTRHNVVEVSEESYTSCTSTNPIGTVYNTGPVNVTLNRTGQHYYICSIGQHCTSGQKLAINVLASALPPSTAAPPPPPPPPMSLASTFSPSSIPFLFICSFIFVFLDIMHGP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00123 181 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Phco1g00123 181 SUPERFAMILY Cupredoxins 31 133 IPR008972 -
Phco1g00123 181 ProSitePatterns Type-1 copper (blue) proteins signature. 109 125 IPR028871 -
Phco1g00123 181 Gene3D - 30 143 IPR008972 -
Phco1g00123 181 PANTHER BLUE COPPER PROTEIN 31 139 IPR039391 GO:0009055
Phco1g00123 181 FunFam Cupredoxin superfamily protein 29 136 - -
Phco1g00123 181 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Phco1g00123 181 CDD Stellacyanin 32 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00123 Phco-Chr1 911640 912283 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00123 1 911640 912283 Phco1g00123 1 911640 912283 ECH