Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00121 ATGACAGCCTTGTTCAACGGGCGTTATTACCTTCAAACTTCAAACTTCTCTTCTCTTTTCACTCTACTATGCCCTGATTTCGATGTACCATCACCCTCTCTCACCCTACCTACAAGCGTTTTCCTTCTTTTCCTTTTTCTTTTCATTTACCTCGGGAAAGTGGAAAAAGTGGAATATGGTGGCAGGAAGGGAGTGGTGGTGACTGACAGGTTACCGGCTGCAGGTGGTGTCGGGTGGGAAGAGAGGCTGCAAAGACGCAGCATTTTGCAGAACACAGGCGCATGCCAAGTGACCGGTTACCTGGACAGCAGGTTGGGTGTTCCATTAAGGGCCACTCTCAAACACTTTGATAAATTAAGTGAATTGATAGAGTCAGCCAAAACGGGTCTGCCACTGTGGATGCTTGGTTTGGGTGCCGACCTCTTGTGGGCCGACATGAACCGCCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTATCCGAGGTTGTCAACATCTATTTCCATGAATCTGAAAAGCTTCTCACCAATCTCAGAGCTTTGCTGATGGAGAGGGAGTTTTGGGACTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGTAGCTCCAGCATTGGCGCCAAGAGAGTTAGAAACGTTTGCGTTGCCTTTCGTGCTGCTACTGACCAGAATAACCGTGCTGGTTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAGTACTGCTATCTGAAGAACAAATTGCACGAACTGTTCCAAATTGAGCAGCAACGTGCTTTGGCTGCAGGAGTTAGGTACCCAGTGCAGAATTAG 870 0.4851 MTALFNGRYYLQTSNFSSLFTLLCPDFDVPSPSLTLPTSVFLLFLFLFIYLGKVEKVEYGGRKGVVVTDRLPAAGGVGWEERLQRRSILQNTGACQVTGYLDSRLGVPLRATLKHFDKLSELIESAKTGLPLWMLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLTNLRALLMEREFWDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAATDQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00121 289 Pfam Hpt domain 180 248 IPR008207 GO:0000160
Phco1g00121 289 Gene3D HPT domain 137 289 IPR036641 GO:0000160
Phco1g00121 289 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 174 270 IPR008207 GO:0000160
Phco1g00121 289 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 144 276 IPR045871 GO:0000160|GO:0009927|GO:0043424
Phco1g00121 289 FunFam Histidine-containing phosphotransfer protein 1 137 286 - -
Phco1g00121 289 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 142 276 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00121 Phco-Chr1 892333 895069 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00121 1 892333 895069 Phco1g00121 1 892333 895069 ECH
Phco10g02004 10 41801647 41806274 Phco1g00121 1 892333 895069 PCT