Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00120 ATGGCTCTCATCACCACCCAACCTAAAAACCCCATTTTCCATCGCTGCACCACCCTTCACCGCTCAATTCCACGCCGGGATAATAGTACTACTGTTCTTGGTCTTGGCTCCATTAAAAACTTCAACTTTAACCAAAAACAAAGCAAAATTTCCCTTAAAAACAACCCCTTTACCTATAATTTGGCAGTGACGGCCAAAGCCACGGCCAATGCAGCATTTGGAGAAGGTTTGGAGGCAGAGGAGGGGTCATTGAAACACAGAAGGATTTTGTTGTCTGAAGTTGAGGTGAAGAGAGAGAGGAGTGTTTTCTTTGGGAGGAAATGGAACACTTTGGATGTTGGCACTGCTGGAATTGTGTTGGTCATGCATGTGCTTTGCCTCTTTGCTCCATTCCATCTCAATTGGCCAGCTTTTTGGGTGGCTGTGGCTCTCTACGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCGAAATGGCTTGAATATTTCTTTGCCTATTGTGGGGTTCTGGCACTTCAGGGAAACCCAATTGATTGGGTAAGCACACATAGATACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCCACTGAAGGGTTCTGGTTCAGCCATATGAGCTGGCTCTTTGATACTAATTCTATCATTGAAAGGTGTGGAGAGCCAAATAATGTTGGTGATTTAGAGAAACAACCTTTTTATAGATTTCTCCGAAGCACTTACCTTGTCCACCCTTTTGCTTTGGGAGCCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTAGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTATGGGGGAATCAGGCCTGGAACACCAGGGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTCGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCAGTTGGGTTGGCCACTGAAGTCAAGTTACCCACAGAGAGTCAGAAGCAGAGAATGGCATTCAATAGTGATACAATAACCACATGA 1158 0.4516 MALITTQPKNPIFHRCTTLHRSIPRRDNSTTVLGLGSIKNFNFNQKQSKISLKNNPFTYNLAVTAKATANAAFGEGLEAEEGSLKHRRILLSEVEVKRERSVFFGRKWNTLDVGTAGIVLVMHVLCLFAPFHLNWPAFWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSIIERCGEPNNVGDLEKQPFYRFLRSTYLVHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAVGLATEVKLPTESQKQRMAFNSDTITT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00120 385 Pfam Fatty acid desaturase 135 354 IPR005804 GO:0006629
Phco1g00120 385 PRINTS Fatty acid desaturase family 1 signature 323 337 IPR015876 GO:0016717
Phco1g00120 385 PRINTS Fatty acid desaturase family 1 signature 280 301 IPR015876 GO:0016717
Phco1g00120 385 PRINTS Fatty acid desaturase family 1 signature 158 178 IPR015876 GO:0016717
Phco1g00120 385 PRINTS Fatty acid desaturase family 1 signature 195 224 IPR015876 GO:0016717
Phco1g00120 385 PANTHER ACYL-COA DESATURASE 87 375 IPR015876 GO:0016717
Phco1g00120 385 CDD Delta9-FADS-like 134 366 IPR015876 GO:0016717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00120 1 886920 888499 Phco1g00120 1 886920 888499 ECH