Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00116 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCTCCTTCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGCTTCCCTCCCCTCTCTCTCATCGACCAACTTCGCCCGCTCTTTCCCCACATGGACGACCTGGTTCTTGAGAGGGCTCTTCAGGAGTGTGGGAATGATATAGATGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGGAAATGCAGATGGAAGTGGAAATGCTGAAGGATCGGATGTTATTGTTAATTTGGATGCAGGTAAATTGGAAGATAATGGAAATGCTTCTGTTCCTGAGGACCAGCCTACTTTGAACAACCACCTTCCTGTAGATGGAGCAGAGTGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCGAGAATGCTAGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCACTTCAGAAGGAAAATTTGATGCTGAAAGAACAAATTGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATTTGCTGATTACGAGGTTAAGAACCAGGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGTAACCCCTTTACAGGGAACTTCCCACCTGATATCTTCTAA 783 0.4521 MSAAVCGSKRSFFEDLPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGNADGSGNAEGSDVIVNLDAGKLEDNGNASVPEDQPTLNNHLPVDGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGNFPPDIF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00116 260 Coils Coil 169 196 - -
Phco1g00116 260 CDD CUE 39 74 - -
Phco1g00116 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Phco1g00116 260 Coils Coil 207 234 - -
Phco1g00116 260 Pfam CUE domain 40 76 IPR003892 GO:0043130
Phco1g00116 260 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
Phco1g00116 260 SUPERFAMILY UBA-like 40 81 IPR009060 GO:0005515
Phco1g00116 260 Gene3D - 39 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00116 Phco-Chr1 865284 868675 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00116 1 865284 868675 Phco1g00116 1 865284 868675 ECH
Phco10g02009 10 41836612 41838150 Phco1g00116 1 865284 868675 PCT