Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00111 ATGGCCTTTTCTGCCATGTTTTCTCCCACTCTCAACCTTGCCATTTCTTCCACCACATACTGCTGTAAAAGAAGAATATCAACCACTCGAAGTGTTACAGTGAGAGCTAGCTCCACAGAGAAGGGTGAATCCGAGGACAAAGATGCCTCAGCATTCAACCCTTTCGGGTTTGTCACTGACAACCCTTCAAGCCGCAGTGCTATTCAATTGCCTCAGAGCCCTGCTGAGGATGGCAACGTTGGCCAAATGCTTTATAGGATAGAAGACAAGGGCAAGGAATACGGGTCATACGTTAAATCTGGCAAGTTAAGATGGTTTGTCAGAGAAACTGGGTCAGCAAGCAGCAGAAGAGGAACAATTGTCTTCCTTCATGGTGCTCCTACGCAATCTTATAGCTACCGTGTTGTTATGTCTCAGTTATCGGATGCAGGGTTCCATTGCTTTGCACCAGACTGGATAGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTGATTACACAGAAAAGGAGTTCCACGATGCATTGGATAAACTACTTGAGGTGTTAGAGGTCACATCTCCCTTTTTCCTAGTTGTCCAGGGATTTCTTGTAGGTTCATATGGACTAACTTGGGCCCTCAAGAACTCAAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAGATTCCTCTTCCATTCCTGGACTTTTTCAGCAGCTAAGAATTCCTCTGTATGGTGAATTTACAAGCCAGAATGCTATCATTGCTGAGCGGTTTATTGAAGGAGGTAGCCCTTACGTTCTAAAAAATGAAAAGGCTGACGTGTACCGGTTACCTTATTTGTCAAGCAGTGGACCTGGATTTGCTCTACTTGAAGCTGCAAGAAAAGCTAACTTCAAAGGTACTTTTAGTCAAATAGCAGAAGGATTTGCAACTGAGAGATGGGATAAACCAATACTTCTTGCTTGGGGATTATCAGACAAATACTTGCCTCAGTCTGTAGCAGAGCAGTTTCAGAAAGGAAATCCAGCACAAATCCAGCTGAAATTGATAGAAGGAGCAGGTCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGATGCTTTCAGAATGTTCTTCTGA 1119 0.4361 MAFSAMFSPTLNLAISSTTYCCKRRISTTRSVTVRASSTEKGESEDKDASAFNPFGFVTDNPSSRSAIQLPQSPAEDGNVGQMLYRIEDKGKEYGSYVKSGKLRWFVRETGSASSRRGTIVFLHGAPTQSYSYRVVMSQLSDAGFHCFAPDWIGFGFSDKPQPGYGFDYTEKEFHDALDKLLEVLEVTSPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTDSSSIPGLFQQLRIPLYGEFTSQNAIIAERFIEGGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKANFKGTFSQIAEGFATERWDKPILLAWGLSDKYLPQSVAEQFQKGNPAQIQLKLIEGAGHMPQEDWPEKVVDAFRMFF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00111 372 Pfam Alpha/beta hydrolase family 120 367 IPR000073 -
Phco1g00111 372 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Phco1g00111 372 PRINTS Alpha/beta hydrolase fold signature 208 221 IPR000073 -
Phco1g00111 372 PRINTS Alpha/beta hydrolase fold signature 317 331 IPR000073 -
Phco1g00111 372 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 59 372 - -
Phco1g00111 372 SUPERFAMILY alpha/beta-Hydrolases 96 371 IPR029058 -
Phco1g00111 372 Gene3D alpha/beta hydrolase 91 372 IPR029058 -
Phco1g00111 372 FunFam Alpha/beta-Hydrolases superfamily protein 82 372 - -
Phco1g00111 372 PRINTS Epoxide hydrolase signature 349 371 IPR000639 GO:0003824
Phco1g00111 372 PRINTS Epoxide hydrolase signature 124 142 IPR000639 GO:0003824
Phco1g00111 372 PRINTS Epoxide hydrolase signature 144 159 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00111 Phco-Chr1 831290 835244 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00111 1 831290 835244 Phco1g00111 1 831290 835244 ECH