Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00108 ATGTCGTCGGAGGGTGATGTGTTCGTTGGCGCCATTGACCAAGGTACGAGCAGCAGCAGGTTCATAATCTACGATACATCGAGTAGAATAATCGGATGCCACCATGTGGAGTTCACGCAGTTCTACCCGCAAGCGGGGTGGGTGGAGCATGACGCCACGGAGATCTTGGAGAGCGTGAAGGTGTGCGTGGCCAAAGCCGTCGACAAGGCCACCGCGGATGGCTTCAACGTGGACAAGGGACTCAGGGCCATCGGTCTCACCAATCAGAGAGAAACTACTGTTGTCTGGAGCAAATCCACTGGTCTCCCTCTCTACAACGCCATCGTTTGGATGGATGCTCGTACTTCTTCCATTTGCAGGAGACTGGAAAAGGAGTTATCCGGCGGTAGAAACCACTTTGTGGAGAGCTGTGGTTTGCCCATTAGCACATACTTTAGTGCAGTGAAGCTGCTGTGGCTGATGGAGAATGTGCTTGCGGTGAAGGATGCTATAAAGAAAAAGGATGCGCTGTTTGGAACTATAGACTCTTGGTTGATATGGAATTTAACTGGTGGTGTAAAGGGGGGATTGCATGTTACTGATGTTTCTAATGCATCTCGGACAATGTTAATGAATCTAAAAACCCTTGAGTGGGATGAATCTGTCTTACAAACTCTTAAAATTCCTGCTGAAATTTTACCTAAAATTGTTAGTAATTCTGAAGTTATAGGAGATATTGGGACTGGATGGCCAATTGCTGGTATCCCTATTGCTGGATGTTTAGGGGATCAACATGCTGCAATGCTGGGACAAGCATGCCGTACTGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTTATACTACTAAATACTGGTGAAAGGATAGTTCAATCATCACATGGTCTTCTATCCACGGTAGCCTTCAAGCTTGGCCCAAAAGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACGGTCTTGGCCTCATTTCCAGTGCTTCAGAGATAGAGGATCTGGCATTACAGGTTGAATCCAGTGGTGGGATTTACTTTGTTCCTGCCTTTAATGGATTGTTTGCTCCATGGTGGCGTGATGATGCTCGCGGCGTTATTGTTGGAATGACAAGGTTTACAAGCAAAGGTCACATTGCTCGAGCGGTGCTTGAGAGCATGTGTTTCCAAGTGAAAGATGTCTTGAATTCTATGCATAAAGATTCAACACAAGATGGATCCTCCTCAAAAGAGGAATTGTCGCTTAGAGTGGATGGTGGTGCAACTGTTAACAACCTCTTAATGCAGATTCAGGCAGATTTGTTGGGAAGTCAAGTAGTTAGACCTGTTGACATAGAGACAACAGCACTAGGAGCAGCCTATGCTGCAGGGTTGGCTACTGGTGTTTGGAAAGAAGAACATATTTTCAATTCCGGGGAGAAGATGAAAAATGCTAAAGTTTTCCGTCCCATAATGACTGAGGAAGTAAGGAAAAAGAAATTTGAATCGTGGTGCAAAGCTGTTACTAGAACTTTCGACTTAGCTGATCTTGCTATTTGA 1566 0.4579 MSSEGDVFVGAIDQGTSSSRFIIYDTSSRIIGCHHVEFTQFYPQAGWVEHDATEILESVKVCVAKAVDKATADGFNVDKGLRAIGLTNQRETTVVWSKSTGLPLYNAIVWMDARTSSICRRLEKELSGGRNHFVESCGLPISTYFSAVKLLWLMENVLAVKDAIKKKDALFGTIDSWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLEWDESVLQTLKIPAEILPKIVSNSEVIGDIGTGWPIAGIPIAGCLGDQHAAMLGQACRTGEAKSTYGTGAFILLNTGERIVQSSHGLLSTVAFKLGPKAPTNYALEGSVAIAGAAVQWLRDGLGLISSASEIEDLALQVESSGGIYFVPAFNGLFAPWWRDDARGVIVGMTRFTSKGHIARAVLESMCFQVKDVLNSMHKDSTQDGSSSKEELSLRVDGGATVNNLLMQIQADLLGSQVVRPVDIETTALGAAYAAGLATGVWKEEHIFNSGEKMKNAKVFRPIMTEEVRKKKFESWCKAVTRTFDLADLAI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00108 521 Pfam FGGY family of carbohydrate kinases, C-terminal domain 271 468 IPR018485 GO:0005975|GO:0016301
Phco1g00108 521 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 374 394 IPR018483 GO:0005975|GO:0016773
Phco1g00108 521 Gene3D - 265 516 - -
Phco1g00108 521 SUPERFAMILY Actin-like ATPase domain 266 514 IPR043129 -
Phco1g00108 521 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 144 156 IPR018483 GO:0005975|GO:0016773
Phco1g00108 521 FunFam Glycerol kinase 265 516 - -
Phco1g00108 521 PIRSF GlpK 7 520 IPR000577 GO:0005975|GO:0016301
Phco1g00108 521 NCBIfam glycerol kinase GlpK 8 514 IPR005999 GO:0004370|GO:0006072
Phco1g00108 521 Pfam FGGY family of carbohydrate kinases, N-terminal domain 9 263 IPR018484 GO:0005975|GO:0016301
Phco1g00108 521 Gene3D - 5 263 - -
Phco1g00108 521 PANTHER SUGAR KINASE 8 515 - -
Phco1g00108 521 SUPERFAMILY Actin-like ATPase domain 9 266 IPR043129 -
Phco1g00108 521 FunFam Glycerol kinase 6 264 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00108 1 801022 803384 Phco1g00108 1 801022 803384 ECH