Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00100 ATGGATTGGTTCTCCTGGCTTTCCAAAACATGCCTTGAGCCAACCCTAGTGTATGAGTATGGCCTTACTTTTGCACACAATGAGCTTGAAGAAGAAGACATAATCTACTTCAACCATGAGTTTCTCATGAGCATGGGGATCTCCATAGCCAAACACAGGCTAGAGATTCTGAACCTTGCAAGGAAAGTGAAGGGAAAGAGGGCACCACGCCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGCTTAGCCAATTACTTTCGGACGTTCGTCAGCTGTGAAGAAGAGACATCAGCACTTGTTGTGGTGCCATCATCACTATCATCATCAAGGACAAGGCCTTATGGGACAAGATGGAAGAGTCATGTGATGAAGAGGAACAAAAGGTTGATGGTGGCTAAGCAAGAGAGGCTCTTGCTCACAAATGGAAGTCCTAACACTGTGGTGCATGGTCTTGATACTTTTACCAGTCCCATGGTTTACCATTCCCACAAGGAGCAAAAAATGGAAGGAGATGATGATGATGAATACTGGTCTTCAGCTGCTACAGAAGAAATCAGGTGGGATACCATGTTCCAGGATCTAAAGCCAAATTGA 606 0.4571 MDWFSWLSKTCLEPTLVYEYGLTFAHNELEEEDIIYFNHEFLMSMGISIAKHRLEILNLARKVKGKRAPRPVARLMVAIKRTKRCLANYFRTFVSCEEETSALVVVPSSLSSSRTRPYGTRWKSHVMKRNKRLMVAKQERLLLTNGSPNTVVHGLDTFTSPMVYHSHKEQKMEGDDDDEYWSSAATEEIRWDTMFQDLKPN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00100 201 PANTHER OSJNBA0033G05.11 PROTEIN 1 201 - -
Phco1g00100 201 Gene3D - 1 68 IPR013761 -
Phco1g00100 201 SUPERFAMILY SAM/Pointed domain 6 67 IPR013761 -
Phco1g00100 201 CDD SAM_superfamily 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00100 Phco-Chr1 735857 736462 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00100 1 735857 736462 Phco1g00100 1 735857 736462 ECH
Phco10g02020 10 41895092 41895697 Phco1g00100 1 735857 736462 PCT