Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00078 ATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCTATTCCACTCCCACCGCCACCGATCTCTTCCGCTCCGCTTCAAGTAAGGCAAGCTCGAAGGAGTCTGAACGAATTGATAGTCTATTCTATTCATTTGCTAATGGGTCTACTGGGATGATTGACCCAGAGGGAATTGAAACACTTTGTGCTGCTATGGAGGTTAATCATACAGATGTGAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGCTATTTTACATTGGACGAGTGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACAGTTAGTAAATTGAAGAAGGCACTTCCAGACCTAGAAAAAGAGGTCAGGAGGCCGTCAAACTTTGCAGATTTCTATACATATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATCGAGAGCATCTGCGAGTTACTTACTCTTGTTTTGGGTTCAGCATTTCCTCCCCAAGTCAACTCATTTGTAGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGTAACGAGATAAGTTATCCAACCCTTAATGACTATGATCCTGAGCTTGCCTGGCCCTTGATCCTGGACAATTTCGTTGAATGGGTGAGAGAAAAGGAAAATTAA 687 0.4207 MRRSSASKKTGQSYSTPTATDLFRSASSKASSKESERIDSLFYSFANGSTGMIDPEGIETLCAAMEVNHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYTYAFQYCLTEEKQKSIDIESICELLTLVLGSAFPPQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISYPTLNDYDPELAWPLILDNFVEWVREKEN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00078 228 Pfam Cullin binding 108 222 IPR005176 -
Phco1g00078 228 Gene3D - 31 121 - -
Phco1g00078 228 PANTHER RP42 RELATED 8 227 IPR014764 -
Phco1g00078 228 FunFam Defective in cullin neddylation protein 123 228 - -
Phco1g00078 228 FunFam Defective in cullin neddylation protein 31 121 - -
Phco1g00078 228 Gene3D Cullin, PONY binding domain 123 228 IPR042460 -
Phco1g00078 228 SUPERFAMILY EF-hand 28 195 IPR011992 -
Phco1g00078 228 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00078 Phco-Chr1 562245 566025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00078 1 562245 566025 Phco1g00078 1 562245 566025 ECH