Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00077 ATGCTGTGCAGGAAGAGCTCCAAAAACGGCGTCGCTTCGGGATCGGTCCCGGTGTACCTCAACGTCTACGATCTGACTCCAATGAACGGTTACGCTTACTGGTTCGGCCTCGGAGTGTACCATTCCGGCGTGCAAGTTCACGGCGTTGAATTCGCGTTCGGGGCTCACGAGTATCCGTCGACGGGGATATTCGAGGGGGAACCAAAGAGGTGCGAAGGTTTCAGTTTCAGAAAAACGATTCTGATCGGAAAAACCGACATGGGACCAGGTGAAGTGAAGGCGGTTATGGAAGAACTCGCTGCTGAATACAGAGGAAATGCTTACAATCTCATCACAAAGAATTGCAACCATTTCTGCAACGATGCTTGTCTAAGACTCACCGGAAATCCCATCCCCAGCTGGGTCAATCGTCTTGCCAGAATCGGTTTTTTGTGCAACTGTGTTCTTCCTGTGACATTGAACTCAACAAAAGTTAGGCATCACAGGATGGAAGAGAAGCAATGCGAGGGAGAGAAGGAAGCATTAGCGAGTGAGGGAAAGAAGCTTAGTGCACCAAATTCAACACCATCCCCTGCGAGAGGGCGCAGGGGAAGGAGCAGAACCCGTCGTCCCCTCCCTCCACCTTCTCCCTTGATTGTTGGGTCTTCATCATGA 654 0.5122 MLCRKSSKNGVASGSVPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEFAFGAHEYPSTGIFEGEPKRCEGFSFRKTILIGKTDMGPGEVKAVMEELAAEYRGNAYNLITKNCNHFCNDACLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRMEEKQCEGEKEALASEGKKLSAPNSTPSPARGRRGRSRTRRPLPPPSPLIVGSSS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00077 217 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Phco1g00077 217 MobiDBLite consensus disorder prediction 168 217 - -
Phco1g00077 217 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Phco1g00077 217 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Phco1g00077 217 Gene3D PPPDE domains 12 171 IPR042266 -
Phco1g00077 217 PANTHER DESUMOYLATING ISOPEPTIDASE 15 178 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00077 Phco-Chr1 556841 557996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00077 1 556841 557996 Phco1g00077 1 556841 557996 ECH