Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00033 ATGAAGAAGAAGACGATGGGGCAGTCGAAGTCCGGCAACAGTGACACCGTGCATTCGCCGCTTGTCACTTATGCTTCCATGATTTCTCTTCTCACGCTCTGTCCTCCATTTGTCATTCTCCTATGGTACACCATGACTTTTGCTGACGGATCTGTTGCTGAGATGTGGGATTATTTGAAGCAGAATGGGGTACAGGGCTTCCTACATATATGGCCCAGGCCAACTGCTACGGCATGCAAAATCATTGTCGTCTACGCTGTCTTTGAAGCAGCGCTTCAGCTCCTTCTGCCCGCCAAAACCGTTTACGGCCCTATTTCTCCAACTGGCCATCGACCAGTCTACAAGGCAAACGGTGTGGCAGCGTATTTAGTCACCTTGATTACTTATATTGCCCTTTGGTGGTTTGGGATATTCAACCCTACAATTGTTTATGATCATTTGGGAGAAATATATTCAGCACTCATCTTCGGGAGCTTTGTCTTCTGTATTTTATTGTACATAAAAGGTCTTTTGGCACCATCTTCCACAGATTCTGGCTCAAGTGGAAACATAATCATTGATTTTTACTGGGGGATGGAACTCTATCCGCGCATTGGAAAATACTTTGACATAAAAGTTTTCACGAACTGCAGATTTGGAATGATGTCATGGGCGGTTCTTGCATTGACCTACTGTATAAAGCAGTATGAAGAAAATGGAAAAGTATCCGACTCAATGCTCGTAAATACAGCATTAATGCTAGTATATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACACGATCGAGCTGGATTTTATATTTGCTGGGGTTGCTTGGTGTGGGTTCCATCTGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTCGGCATTGAGCTAGCGCTCTCAATTTTATTGGCTGGCATTCTTTGCATATTCATCAACTATGACTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAAAGCACGGTCTGGGGAAAAGCTCCGTCAAAGATAGAGGCCTCGTATACCACTACTACCGGGGAAACTAAAAGAAGCCTTCTTTTAACCGCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATATTGGCAGCTTTCTTCTGGACAGTCCCAGCTCTTTTTAATCATTTTTTGCCTTACTTCTACGTGATATTTCTTACCATCCTTCTCTTTGATCGGGCAAAACGTGATGATGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTATATTGCGACAAGGTACCCTACAGAATAATTCCAGGAATATACTGA 1335 0.4322 MKKKTMGQSKSGNSDTVHSPLVTYASMISLLTLCPPFVILLWYTMTFADGSVAEMWDYLKQNGVQGFLHIWPRPTATACKIIVVYAVFEAALQLLLPAKTVYGPISPTGHRPVYKANGVAAYLVTLITYIALWWFGIFNPTIVYDHLGEIYSALIFGSFVFCILLYIKGLLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVSDSMLVNTALMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGIELALSILLAGILCIFINYDCDRQRQEFRRTNGKSTVWGKAPSKIEASYTTTTGETKRSLLLTAGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDKVPYRIIPGIY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00033 444 Pfam Ergosterol biosynthesis ERG4/ERG24 family 46 444 IPR001171 GO:0016020|GO:0016126|GO:0016628
Phco1g00033 444 Gene3D - 232 443 - -
Phco1g00033 444 ProSitePatterns Sterol reductase family signature 1. 182 197 IPR018083 GO:0016628
Phco1g00033 444 PANTHER DELTA(14)-STEROL REDUCTASE 15 444 - -
Phco1g00033 444 FunFam Putative 7-dehydrocholesterol reductase 234 443 - -
Phco1g00033 444 ProSitePatterns Sterol reductase family signature 2. 408 431 IPR018083 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00033 Phco-Chr1 307643 311873 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00033 1 307643 311873 Phco1g00033 1 307643 311873 ECH