Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00027 ATGGAGTTTTTGAAAATCAAGAAGTTTAGAAAATCTCCGAAAGCAGATGGAGAAAAGAATTTGTCAGGCAAGGCAGTGGCTGAGCCCGAGGAACCAAAGCTCAACACTGACGGTCCTGATCAGTGTAAATCAGGAAATGCAGATTCTGCTGGTGAAGCCGAGGATGACGATGATTTTATCACCAATGAGGTTAAGAGGAGGTTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACAAGCTCAAACGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTTGATGCTGTGTTTGAAAAATACTGTGAAAGAATGCTATTATTTGATCGGATGAGCACTCAACAGCTTAGAGAAGTTGGCAAAGGTTCACAGTGTACTTCAACTTCAAATCGATCTCCAAGATCTGCATCAAAAAAGCTGGCTTCTCCCCTTCGATGTCTTTCCTTAAAAAAATTTGAAGAACCTGATAATGAGACTGAACATCTTCAACAGCCAGAGAATGATCCATACCAGGATATTGAAACAGCATACGTAGGTCAAATTTGCTTGACTTGGGAAGCACTTCATTGTCAGTATTCTCATATGAGTCAGAAGATATCCTGGCAACATGATAATCCTACCTGTTACAACCATAGTGCACAAGAGTTTCAACAGTTCCAGGTTCTATTACAAAGGTTTATGGAAAATGAACCTTTTGAGCATGGCCGTAGAGCTGAAATATATGCTCGCACTAGGAACAATTTGCCTAAACTGCTTCAGGTTCCTAATATACGAGGCTCAGATCATGAGTTGACTGATGATGCAGAGATAAGAGTTCTTGCTCCTGAACTGATCAGGATAATTGAAAGCTCTATCCTAACATTCCACCTTTTCCTGAAAAGGGAGAATAAAAAGTCTAGTGGTGCCACCAACCTGTTTGGAAATCAGAACCAGCTTGCAACTCCTCTACACCAGATTCAGTCAACTCTTGAAAAGAAAGTGGTGAAGCTGAAGGAACTGAGGAGAAAGAAAAAAGGTTGGAAGAAGAACTCTTGGCCACAAAAGCATGAGGACATTCAGCTTTTGCTTGGGCTTGTTGACGTGAAGATGGTATCAAGGGTTCTGAGAATGACGAGGATGACCAGGGAGCAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGATTTATCAAGTGGAAGGTTAGAGAGGGATCCATGTCCCATCCTGTTCCCTTGCTAG 1293 0.4238 MEFLKIKKFRKSPKADGEKNLSGKAVAEPEEPKLNTDGPDQCKSGNADSAGEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCERMLLFDRMSTQQLREVGKGSQCTSTSNRSPRSASKKLASPLRCLSLKKFEEPDNETEHLQQPENDPYQDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSAQEFQQFQVLLQRFMENEPFEHGRRAEIYARTRNNLPKLLQVPNIRGSDHELTDDAEIRVLAPELIRIIESSILTFHLFLKRENKKSSGATNLFGNQNQLATPLHQIQSTLEKKVVKLKELRRKKKGWKKNSWPQKHEDIQLLLGLVDVKMVSRVLRMTRMTREQLFWCEEKMKKLDLSSGRLERDPCPILFPC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00027 430 MobiDBLite consensus disorder prediction 1 37 - -
Phco1g00027 430 Coils Coil 340 367 - -
Phco1g00027 430 MobiDBLite consensus disorder prediction 142 161 - -
Phco1g00027 430 Pfam Protein of unknown function (DUF1666) 195 429 IPR012870 -
Phco1g00027 430 MobiDBLite consensus disorder prediction 84 101 - -
Phco1g00027 430 PANTHER DNA LIGASE (DUF1666)-RELATED 28 430 - -
Phco1g00027 430 MobiDBLite consensus disorder prediction 1 59 - -
Phco1g00027 430 MobiDBLite consensus disorder prediction 79 107 - -
Phco1g00027 430 MobiDBLite consensus disorder prediction 142 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00027 Phco-Chr1 279749 282496 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00027 1 279749 282496 Phco1g00027 1 279749 282496 ECH