Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00022 ATGTGTCTTTGGACTTCAAATGTAAATGCAATGTCTCTCAGAAGCACCGGTTTGTTTTCGTTTCAAATAAATTGCTCCGATTCCAAGCAAGGTGGTCGTGGTTTTGGAGAAAACTCTAACAGGATTAAGACCAACAAAACTGACAAGGGTCTGGTGTCGCAGCAAAGTGTCAAGGGATCAACACCTAAACAGTCTCGCCCTCAGCCTTCTCAGGCACCCCGTTTAAGTTCACAACTTGATGGCAAATCTAGGAACGATTTTTTGGATGTTGACTTTGAGGAACGCCTAAAAACAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGCAAAAGGAATTTGGAGCAATTGACTATGATGCACCGATTTCTTCTGACGATAAGACAATTTCCCTTCCTACTAAGATTGGAGTGGGGGTAGCTGTTGTAGTCTTCGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCGGGAAGTGTTAGTCCCACTGATGACAGTGCTGTGGTCAATAGTAAGTTATCTGAGGAGGAGAAAGCTACTCTCCAGAGTAGGCTCAAGGAATTTGAAGCAACATTAAGTATTTCCCCAAGAGATCCAACTGCTCTTGAAGGAGCTGCAGTTACTTTGGCTGAACTAGGGGAATATGCAAGAGCTGCTTCTCTACTTGATGATTTGACGAAGGTAAAACCAAGTGATGCTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTACGGACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGTTCAGCAATGGTGTCCAAAGATATCCAATTTGAAGTTCTCCGTGGCCTTACCAATTCATTACTTGCTGCCAAAAAGCCAGAGGAGGCTGTTCAATTACTTTTGACTTATCGTGAGGATTTGAGTGCAGAAAACGTACGCAAAAATTCTAATAGCAGTGCATCAGACTCACAGAAGCTGGATCCTGTCCAAGTGGAATTACTTCTAGGGAAAGCCTACTCAGATTGGGGCCATGTCAGTGATGCTGTAGCTGTCTATGATAAACTCATATCTGCTTTCCCTAACGATTTTCGTGGATACTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAATATTGGTGATGCTGAAAGAATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCACTTGTGGACCGTTATTCAAGATGA 1197 0.4227 MCLWTSNVNAMSLRSTGLFSFQINCSDSKQGGRGFGENSNRIKTNKTDKGLVSQQSVKGSTPKQSRPQPSQAPRLSSQLDGKSRNDFLDVDFEERLKTVRRSALEQKKAEEQKEFGAIDYDAPISSDDKTISLPTKIGVGVAVVVFGLVFAFGDFLPSGSVSPTDDSAVVNSKLSEEEKATLQSRLKEFEATLSISPRDPTALEGAAVTLAELGEYARAASLLDDLTKVKPSDADVFRLLGEVKYGLKDYEGSVAAYKSSAMVSKDIQFEVLRGLTNSLLAAKKPEEAVQLLLTYREDLSAENVRKNSNSSASDSQKLDPVQVELLLGKAYSDWGHVSDAVAVYDKLISAFPNDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00022 398 Pfam Tetratricopeptide repeat 207 259 - -
Phco1g00022 398 Coils Coil 172 192 - -
Phco1g00022 398 ProSiteProfiles TPR repeat profile. 321 354 IPR019734 GO:0005515
Phco1g00022 398 Gene3D Tetratricopeptide repeat domain 162 396 IPR011990 GO:0005515
Phco1g00022 398 SUPERFAMILY TPR-like 163 391 IPR011990 GO:0005515
Phco1g00022 398 SMART tpr_5 355 388 IPR019734 GO:0005515
Phco1g00022 398 SMART tpr_5 200 233 IPR019734 GO:0005515
Phco1g00022 398 SMART tpr_5 234 267 IPR019734 GO:0005515
Phco1g00022 398 SMART tpr_5 321 354 IPR019734 GO:0005515
Phco1g00022 398 MobiDBLite consensus disorder prediction 30 82 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00022 1 260743 267242 Phco1g00022 1 260743 267242 ECH