Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00021 ATGATGGAGAATGACATGGAGTCCGGTACTTTGGGCCTGGGGGCTTACCAGGACAAGCCCAGAACCTTCCCCAACATGCGCACCAAACCTTACACCCCTCTGATATTTCGGATACTGTTCGGTATAAATATTCGTGTTCTGTTCATTCTTTTGCTCCTTGGGCTGGGTGCTATCTTTTACGTGGGAGCCAGTACCTCTCCAATCATTGTGTTTGTCATCTCTGTTTGCATTCTCAGCTTCCTTGTTGCCATCTATCTTACAAAGTGGGTGCTCGCAAAAGATGAGGGACCTCCTGAAATGGTTCAGATAGCAGATGCTATAAGAGATGGAGCTGAAGGATTTTTCAGGACCCAGTATGGGAGTATATCCAAGATGGCCATGTTTCTTGCTGTTGTCATTCTATGCATATATTTGTTTCGCAGTACTACTCCACAACAGGAAGCTTCTGGCCTGGGGAGGTCAACTTCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTCTGTTCAGGTATTGCTGGATATGTGGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTTTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCCTTGCAGGTAGCTACTCGTGCAGGTGGTTTATCGGCCATAATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTAGACTCACCTGGTTCAATGAAGGTTACTGATTTACCTCTTCTTCTAGTTGGATATGGATTTGGTGCTTCCTTTGTTGCTCTATTTGCTCAGTTGGGTGGTGGAATATACACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTCGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATACTTGGTGGAACAATGGCACAACGTTGTAAAATTGCAGATCCATCGGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTCGATTTGGTAGTATCATCGGTTGGAATATTTTCTATTCGGGGTACACGTGAAACTGGAGTAATTGCTCCAGTGGAGGATCCAATGACAATTCTTCAAAAAGGATATTCTTTAACGATAGTCTTAGCTGTTCTGGCATTTGGTTTGTCTACCCGCTGGTTACTTTACACTGATCAAGCACCTTCAGCTTGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATTATCACTGCGTACATTTTTGTCTGGATTGCTAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCATATTGGCCCTTTCCAGCTCCACTGGCCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCGGCTTTCTGGCTCGGTCACACCTCTGGACTAGTAGATGAAGCAGGAATCCCAACTGGTGGGTTGTTTGGCACTGCTGTGGCAACGATGGGAATGCTAAGCACCGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCTGATAATGCAGGAGGAATTGTGGAAATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACGGATGTCCTTGATGCAGTAGGAAACACGACCAAAGCTACCACCAAAGGCTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGACGAGGTTTCTGCTTTTGCTCGTGAACCTTTCAAACAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGTTTGCTAGGTTCTATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCAGAACTGCTCAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAAAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTACGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGCAGTCGGTTTTGTATTCCGAATTTTGGGCTACTATACAGGGCAACCTTTACTCGGGGCTAAAGTTGTGGCTGCTATGCTCATGTTTGCAACAGTGTCTGGTATTCTCATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGGAAGGGAAGTGAAGCTCACAAAGCAGCCGTAACTGGAGATACAGTGGGAGATCCATTCAAAGACACAGCTGGTCCTTCAATCCATGTCCTTATAAAGATGCTCGCAACGATTACACTGGTAATGGCTCCAATCTTCCTGTGA 2412 0.4494 MMENDMESGTLGLGAYQDKPRTFPNMRTKPYTPLIFRILFGINIRVLFILLLLGLGAIFYVGASTSPIIVFVISVCILSFLVAIYLTKWVLAKDEGPPEMVQIADAIRDGAEGFFRTQYGSISKMAMFLAVVILCIYLFRSTTPQQEASGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIADPSGFILFPLVVHSFDLVVSSVGIFSIRGTRETGVIAPVEDPMTILQKGYSLTIVLAVLAFGLSTRWLLYTDQAPSAWFNFALCGLIGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGHTSGLVDEAGIPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAREPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00021 803 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 93 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Phco1g00021 803 PIRSF H+-PPtase 62 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Phco1g00021 803 NCBIfam V-type H(+)-translocating pyrophosphatase 71 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Phco1g00021 803 Pfam Inorganic H+ pyrophosphatase 77 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Phco1g00021 803 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 66 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00021 Phco-Chr1 249762 258422 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00021 1 249762 258422 Phco1g00021 1 249762 258422 ECH