Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02078 ATGGCTTCTATCCCATGCATCAGCCACCCCCCCATCACTTCCAAGCTTAACAATTTCTTCCCTTCACCTCACGTTTCTGCCTCAAACTTGGCCTCACGGTTTCTGGGCACAAAAAAAAGTGTTGGGTGGCGCAGCCTCACCTCTAGAATTGGCCCCTCCAACGGCTCCAAAGCCACGTGCTGGTTCAGGTTCGGCAAGAACGGTGTTGACGCCCAAGGTGCTGGCATTTATGGCAGCCAGGCCCGTGATGACTTTGACAGAGATGATGTGGAACAGTATTTCAACTACATGGGGATGCTGGCTGTAGATGGTACCTATGATAGAATGGAAGCTCTTCTAAGCCTAAAGATCCACCCTGTGGACATCCTTCTCCTATTAGCTGCATCAGAAGGTGACAAACCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAAAATATGACGTAAAAGATGGAGACGGTAGGACGGCACTTGACAGGGCCAACGAAGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAAAGGGCATGA 531 0.4802 MASIPCISHPPITSKLNNFFPSPHVSASNLASRFLGTKKSVGWRSLTSRIGPSNGSKATCWFRFGKNGVDAQGAGIYGSQARDDFDRDDVEQYFNYMGMLAVDGTYDRMEALLSLKIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDGDGRTALDRANEEIKDFILNFSVQRA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02078 176 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 176 IPR044242 GO:0006886|GO:0009570|GO:0090391
Phco11g02078 176 SUPERFAMILY Ankyrin repeat 99 169 IPR036770 -
Phco11g02078 176 Gene3D - 120 175 IPR036770 -
Phco11g02078 176 FunFam Protein LHCP TRANSLOCATION DEFECT 84 175 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02078 11 17223133 17225878 Phco11g02078 11 17223133 17225878 ECH