Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02072 ATGAAGCACCCAAAACCCCAAAACCACACAAACCCAACACCATCACCCTCATCAAGATCTTCATCCTCAGCATCTTCACTCTCATCCCACCTTGCTATGGTGGAGCTCAAGCAGAGGATCCTCACCTCCCTATCCAAGCTCTCCGACCGCGACACGCACCAGATCGCAGTCGAGGACCTCGAGAAGACCATTGCTGCGCTCTCGCCGGACGCCATTCCCATGATCCTCAACTGCCTCTACGACGCCGCCACCGACCCTAAGCCCGCCGTCAAGCGAGACGCCCTGCGCCTCCTCGCCGCCGTCTGCGCCGCCCACGCCGATGCCGCGGCCGCGCACCTCACCAAGATCATCGCCCATGTCGTGCGCCGCCTCAAGGACGCCGACTCCGCCGTGCGCGACGCCTGCCGCGACACCGTCGGCGCGCTCGCGGCGCAGTATCTGAAGGGTGACGGCGGGGGAGGGGGTGTCGGGACGGTGGTGGGGCTGTTCGTGAAGCCGCTGTTCGAGGCCATGGGTGAGCAGAACAAAGGGGTACAGGCGGGTGCGGCGGTGTGCATGGCTAAGATGGTGGAGTGTGCTGGCGGCGGAGGGGAGGCGCCGGTGGCGGCGTTCCAGAAACTGTGCCCGAGGATCTGCAAGCTGCTCAACAGTCCCAATTTCATGGCCAAGGCGGCGATTTTGCCGGTGGTTGCCAGCTTGTCACAGGTTGGAGCAATTGCACCACAAAGTTTGGAACATTTGCTGCCCAGCATCCATGAATGTCTTTCTAGTACGGATTGGGCAACGCGTAAAGCAGCAGCTGAGGCATTAAGTTCTTTGGCATTGCATTCAAGCAGTTTGGTTATTGATAAAGCAGCACCCACACTGGAAGTACTTGAGGCTTGCCGATTTGACAAGATAAAACCTGTAAGAGATAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATCGCAGGGAAAGGAGATGGGTCTCTTGATGATTCAAAGCCCTCGTCTGATGGGGGGAATGAATCAGCTATTTCGTCAGATACAAGTGACCCGAAAAAAGTAAGTCTTGATGAGAGGAAGACTAATTCATCAACTAGTTCTTCAAACCTGGATTCAACTTCTAAGGCCAAAGCAGCTGGCATCTCTGAGAAGGCGGTTGTAATACTGAAAAAGAAAGCACCCGCCTTATCTGATAAAGAACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCAGATGATTTACCAGTGGAAGTAGTTGTTCCTCGGAGAGGCCTTAATTCTTCTAACTCCAACAACGAGGAAGAGTCAGAGGCAAATGTTAAAGATTCAAAAGAAAGAACAAGTTCTGTTGGAAACATCCCTAATGATGATTTTCATGGATCCTTTAATAAATATCGTATCTTTGAGAGAGGCAATGATGGAAATTCCAAACAAAGGAATTATGATGATTTTGGCCATGACAGATACCCTGAAAGAAGGGTGAACTCAAAAGAACTGAGGACTAAGGCATATGAAACTGATGATAGGACTGAAAATGATCAGAGGGAGGGTTCTGCCAATCTTTCAGGTTTTTCTAAAACTGATGGTCAATCTGAAGTACCCTTCTCCAATAACAGAGGAAATTGGTTGGCCATCCAGAGGCAGTTGCTGCAACTGGAAAGGCAACAAGTTCATCTAATGAATATGCTTCAGGATTTCATGGGTGGATCACATGATAGTATGGTGACTCTAGAGAATAGAGTTCGAGGTCTAGAGAGAATTGTTGAAGACATGTCTCGAGATTTATCCATATCATCAGGTCGTAGAAACTTTACAGGGTTTGAAGGATCATCTAGCAGGCCATCTAGCAAGTATAATGGTTTTAATGACTACTCCAGTTCCAAGTATGGAAGAGGCGGTGATGGACGCATTCAATTTGGTGAAAGATTTTCCCAATCTGATGGAAATGCTTTGGGAATGAGGGGAAGAGGTCCATCTTGGAGATCTGACATGTCTGAAGGGTGGGATCTTCCTGGGTATGGTTCTTCTAGAAATAATAATCAGGTTTCTTCAAGGAGGGCTTTTGGTGGTAGTTCTGCTGATGGAAGATCACCAAAATCTGTGCATGAGAGTGATCAATCAGGAAATAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGACCCTCTGCTAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACTTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAGCATCTCGAGCAACAAGGGTAGCAATCCCTGAAATGACTGCAGAAGCTCTTGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATTTGGACTTCTTGGACCAATGCAATGGATGCCCTTCAAGTAGGTGACACAGATTCAGCCTTTGCAGAAGTATTGTCCACTGGTGATGATATTTTGCTTGTAAAGCTAATGGATAGATCAGGTCCTGTAATTGACCAACTTTCAAGTGAAGTTGCATGTGAAATTGTGAATGCCATTGGACAATTCTTACTGGACCAGAATATGTATGACATCTGTTTGTCTTGGATTCAACAGTTGCTGGAGATAGTATTGGAAAATGGAGCTGATACCTTTGGCATCCCCATGGAAGTGAAGAAAGAGCTATTACTGAATTTACATGAAGCTTCTACAGATACAACTGAGGCTTGGGAAGGGGTACATCCTGATCAGCTTCTATTGCAGTTGGCATCAGCCTGGGAAATTGATCTACAACAGCATGACAAATAG 2763 0.4799 MKHPKPQNHTNPTPSPSSRSSSSASSLSSHLAMVELKQRILTSLSKLSDRDTHQIAVEDLEKTIAALSPDAIPMILNCLYDAATDPKPAVKRDALRLLAAVCAAHADAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGGGEAPVAAFQKLCPRICKLLNSPNFMAKAAILPVVASLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKAAAEALSSLALHSSSLVIDKAAPTLEVLEACRFDKIKPVRDSINEALQLWKKIAGKGDGSLDDSKPSSDGGNESAISSDTSDPKKVSLDERKTNSSTSSSNLDSTSKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEANVKDSKERTSSVGNIPNDDFHGSFNKYRIFERGNDGNSKQRNYDDFGHDRYPERRVNSKELRTKAYETDDRTENDQREGSANLSGFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFTGFEGSSSRPSSKYNGFNDYSSSKYGRGGDGRIQFGERFSQSDGNALGMRGRGPSWRSDMSEGWDLPGYGSSRNNNQVSSRRAFGGSSADGRSPKSVHESDQSGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGASRATRVAIPEMTAEALADDNVGQERDAIWTSWTNAMDALQVGDTDSAFAEVLSTGDDILLVKLMDRSGPVIDQLSSEVACEIVNAIGQFLLDQNMYDICLSWIQQLLEIVLENGADTFGIPMEVKKELLLNLHEASTDTTEAWEGVHPDQLLLQLASAWEIDLQQHDK 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02072 920 MobiDBLite consensus disorder prediction 413 455 - -
Phco11g02072 920 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 25 888 IPR033337 GO:0005874|GO:0008017
Phco11g02072 920 MobiDBLite consensus disorder prediction 322 372 - -
Phco11g02072 920 FunFam Microtubule-associated protein TORTIFOLIA1 29 149 - -
Phco11g02072 920 Gene3D - 35 147 IPR011989 -
Phco11g02072 920 MobiDBLite consensus disorder prediction 597 730 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 329 346 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 356 372 - -
Phco11g02072 920 Coils Coil 573 593 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 468 514 - -
Phco11g02072 920 Gene3D - 148 311 IPR011989 -
Phco11g02072 920 MobiDBLite consensus disorder prediction 515 532 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 597 625 - -
Phco11g02072 920 FunFam Microtubule-associated protein TORTIFOLIA1 150 309 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 468 532 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 1 28 - -
Phco11g02072 920 SUPERFAMILY ARM repeat 41 868 IPR016024 -
Phco11g02072 920 MobiDBLite consensus disorder prediction 12 28 - -
Phco11g02072 920 MobiDBLite consensus disorder prediction 671 689 - -
Phco11g02072 920 SMART TOG_3 65 306 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02072 Phco-Chr11 17180694 17187536 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02072 11 17180694 17187536 Phco11g02072 11 17180694 17187536 ECH