Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02061 ATGTTTTCCGATGAAGAAATTGAAGGAATAAAAGAAGTTACAAATTGGGATGACATCTCACGGTTCAGAGAGAACGTATTCGAAGGAAGATGGGAGAACGTTATTCCTGAATATATAGACTACAGTGACTACCACAAAATTATAATCAATGAAAGCAGAGGCACTGCACTGCATGTGGCAGTGAATGATGGGAAAGTGGAGCTTGTTAACATTCTTGTTGAAGCAATCTTGAGCCATGAAGGGAGGGCAGTGCTGAGGGCTGACAGTGCACTGAGATCAACCAATGAGAGAGGGGACACTCCTTTGCACCTTGCAGCCTCAAGAGGGTTCATTGGCATGTGTAAGTGCATCATAGGGGAATATGGTGAAAGGAAGGACTTGATTAGGGTTAGGAACGACAATGGTGAAACACCTATTTTCAAGGCTGTGCTCACAGGCCAAACAAAGGTCTTTGTGTACCTTCACCATGTTTCCAAAGATTTAAAGGTTTCACTTAGGAACTATGATGGAGACAACATCCTTCACTATTCCATTTGGAGAGAATTCTTGGGTAAGCAAGCTTTTAATTCCATCTTCATATCTATCTAG 588 0.4201 MFSDEEIEGIKEVTNWDDISRFRENVFEGRWENVIPEYIDYSDYHKIIINESRGTALHVAVNDGKVELVNILVEAILSHEGRAVLRADSALRSTNERGDTPLHLAASRGFIGMCKCIIGEYGERKDLIRVRNDNGETPIFKAVLTGQTKVFVYLHHVSKDLKVSLRNYDGDNILHYSIWREFLGKQAFNSIFISI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02061 195 SUPERFAMILY Ankyrin repeat 46 179 IPR036770 -
Phco11g02061 195 Gene3D - 20 188 IPR036770 -
Phco11g02061 195 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 50 177 - -
Phco11g02061 195 Pfam Ankyrin repeats (many copies) 54 116 IPR002110 GO:0005515
Phco11g02061 195 SMART ANK_2a 134 163 IPR002110 GO:0005515
Phco11g02061 195 SMART ANK_2a 52 81 IPR002110 GO:0005515
Phco11g02061 195 SMART ANK_2a 97 126 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02061 Phco-Chr11 17096730 17097741 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02061 11 17096730 17097741 Phco11g02061 11 17096730 17097741 ECH