Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02050 ATGATCCAATGGACGAAGCAGTTGAATGCTGCATTTGGGACTGCCTTTCTTTGGCTGATTTGCTTGATTTACTTCACCCAGGGTTTTAGGTCTTTTGTATGGACAGCGATTTCCTACCAGCTTAAAGATAATCTAAAGTTGTCACCTTCAGCTTCCCAATTTGTGTTTTCAGTAGCATTTTTTCCATGGAGCATTAAACCATTATATGGAATACTTTCTGATTGCATTCCAATTAAAGGAAGAAAACGGAGTCCCTACTTAGTGATTGCCACTGTGCTTTCCCTAGTGCCTTGGTTGATTTTAGGCTTAAATTCAACCTTGAGAGATTCAACATGGCACCTGATGGTATTGTTGACTGCGCAAAACTTGGGCTCAGCCATGGCGGATGTTGTTGTTGATGCAATGATAGCCGAGGCAGTAAGATTTGACCGGGCCTCCTTTGCAGGAGATCTCCAGTCAATATCTTGGTCTTCTATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGAGGATATGCATTATCCAATTTACGGATAGATGCTATTTTTCTTCTATTTTGTGTACTACCATGCATACAGTTATTATCATGCTGTTTTGTGGAGGAGAACTCAGTAAATAGCAAAGTTTCACTAGAAAATTCAATTGTAAGAGATTCACATATGAATGGTAGTACTCTAGATGAAGGGAGTCCTTTAACCAAAAAGTCCCATAGCAGCACACGAAGAAGAAAGAAGGGAAAAAAGAATGCAAAAGGAAGATCAGTAAATACCAGCAAATCAAAGACTTTGAACAAAGAAGATTCCCTGGCATTAAAGTGGTTCCATTCTTTGAAAGAAGCTATTTATGATTTGTGTCGTGCATTTAGACAGCCAATGATTTGGAGACCTATGTCTTGGTTTTTCCTGGCTCACATTACCATTCCGAATCTTTCAACTGTCATCTTCTACTATGAAACCGAGGTTTTAAAGTTAGAACCATCTTTCCTTGGGACTGCACGGGTTGTTGGTTGGTTGGGACTTATGCTGGGAACCTTCATTTATAATCGTCACCTGAAGTATATGACCCTACGGAAAATCCTCATGTGTGCCCATATTGGGTTGGCCTTCTTGAATCTTCTGCAAATTGTGGTAGTTTCTAGGAAAAATATTGCCTTTGGTATCTCAGACAAGATTATGGTGCTTTTCGGCTCAGCTCTTGTTGATGGAATCAATCAATTCAAGTTTATGCCTTTCCTGATCTTATCTGGACAACTATGTCCCCCAGGAATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAACTTTGGAACCACAGTGGGGTCTTTTGTGGGTGCTGGTTTGGCTTCTGTGCTGAACATTGATTCAGGATCATTTGACAATCTTCTCTTGGGCATCATAGTTCATGCTTTGTGCAATTTCATCCCAGTTGCTTTTCTGTTTCTGATACCAAAGGAAGCTACTGGTTCATCAACATAG 1482 0.4022 MIQWTKQLNAAFGTAFLWLICLIYFTQGFRSFVWTAISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIPIKGRKRSPYLVIATVLSLVPWLILGLNSTLRDSTWHLMVLLTAQNLGSAMADVVVDAMIAEAVRFDRASFAGDLQSISWSSMALGGICGSLLGGYALSNLRIDAIFLLFCVLPCIQLLSCCFVEENSVNSKVSLENSIVRDSHMNGSTLDEGSPLTKKSHSSTRRRKKGKKNAKGRSVNTSKSKTLNKEDSLALKWFHSLKEAIYDLCRAFRQPMIWRPMSWFFLAHITIPNLSTVIFYYETEVLKLEPSFLGTARVVGWLGLMLGTFIYNRHLKYMTLRKILMCAHIGLAFLNLLQIVVVSRKNIAFGISDKIMVLFGSALVDGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNFGTTVGSFVGAGLASVLNIDSGSFDNLLLGIIVHALCNFIPVAFLFLIPKEATGSST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02050 493 Pfam BT1 family 27 487 IPR039309 -
Phco11g02050 493 NCBIfam folate/biopterin family MFS transporter 18 486 IPR004324 GO:0016020
Phco11g02050 493 SUPERFAMILY MFS general substrate transporter 17 487 IPR036259 -
Phco11g02050 493 MobiDBLite consensus disorder prediction 236 254 - -
Phco11g02050 493 MobiDBLite consensus disorder prediction 222 261 - -
Phco11g02050 493 Gene3D MFS general substrate transporter like domains 14 482 IPR036259 -
Phco11g02050 493 CDD MFS_FBT 18 482 - -
Phco11g02050 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 3 489 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02050 Phco-Chr11 16986272 16990369 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02050 11 16986272 16990369 Phco11g02050 11 16986272 16990369 ECH