Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02049 ATGAGAAGAAGGCCTGGAATTGGAGGGTTGCAGACGCATGCTGCTGCGAGGGATCAATTTCGTTTGCTGGGTGAAAATGTCGCAAAGATCAGAACGGATTTGATGAAGGAGCAGCTTGCCACCTTTCGCTCTCAGCTCGAAGATTTCGCTCGCAAACACAAGAATGACATACGCAAGAACCCTGCATTTAGATCACAGTTTCATGAGATGTGTGCCAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGTTTCTGGGCAGAGTTGTTAGGAATTGGTGACTTCTATTATGAACTGGGAGTTCAAATAGTGGATATTTGCTTGGCTACTAGAGCCCACAATGGAGGACTGATCAACCTGCAGGAACTCTGCCATCTTCTTCGCCAGAGACGAAAAAGTGACCGTGGAGTTGTTTCTGAGGATGATTGCCTGCGTGCTATTAGTAAGCTGAAGGTGCTGGGTAGTGGTTTTGAAGTTATTTCTGTTGGAAAGAGAAAACTTGTTCGTTCAGTTCCAACTGAGTTGAACAAAGACCACAACGAAATTCTAGAACTTGCCCAGGCTCAAGGATTTGTGACAGTCTTTGAAGTAGAAAGACGATTATCTTGGAGTTCTGGCCGAGCCATTGATGCCCTTGATACATTACTTGATGAAGGACTTGCAATGATTGATGATGGACATAGAGATGGTAGACGGAGGTACTGGTTTCCTTGTGTGTCTACCATCTCATCTTCAATAGCAGTTGATTCCTAA 753 0.4489 MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRAHNGGLINLQELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHNEILELAQAQGFVTVFEVERRLSWSSGRAIDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSTISSSIAVDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02049 250 Gene3D - 172 250 IPR036388 -
Phco11g02049 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Phco11g02049 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Phco11g02049 250 FunFam Vacuolar-sorting protein SNF8 91 171 - -
Phco11g02049 250 Gene3D - 91 171 IPR036388 -
Phco11g02049 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 242 IPR016689 GO:0000814|GO:0071985
Phco11g02049 250 Gene3D - 24 85 - -
Phco11g02049 250 FunFam Vacuolar protein sorting-associated protein 172 250 - -
Phco11g02049 250 PIRSF ESCRT2_Vps22 1 246 IPR016689 GO:0000814|GO:0071985
Phco11g02049 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 239 IPR036390 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02049 11 16973576 16984363 Phco11g02049 11 16973576 16984363 ECH