Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01990 ATGGAGAAAGTGAGAAGAGTGGTGAATGAAATAGCCTATGCTCACACTCTCTCTCACCTCACTCCATTTCACCGCTCTCTGCTTCCTTTCCTTTCCATTGCCTCCACACTCTACAAACTCGCCCTCTCACTTCGCCGCTCACTCTACCGACACCGCTTCTTTCAAGTCCAACGTTTGCCAGTTCGTGTGATCAGCGTTGGTAATTTGAGCTGGGGTGGCAATGGGAAGACGCCGATGGTGGAGTTCATCGCTCTCTGCTTTTCGCGTTACGGAATTTCACCTCTCGTTCTTTCCAGGGGTTATGGTGGTGGGGACGAAGTCAACATGCTTCGGAGGCATTTACTTGGGACACCAACTAAGTTTGGTATTGGTGCTAATCGAGCTGCTGTTGCAAGTCATTTTATCAAAAAATATGGCTACATTGATATTTGTAAGAGTTCATGGCATGAGAAACAATACCTTGAACTGAAGGTTCAGGATTCTCTTTATTCAGAAAAAATTGGGGTTGTAGTTCTTGACGATGCTATGCAGCATTGGAGCTTGTGGCGAGATTTGGATATTGTAATGGTTAATGGATTAACTCTTTGGGGTAACCTTCAACTAATGCCGCGGGGACCATTAAGGGAACCTTTGACTGCACTTAGGCGAGCAGATGCAGTTGTAATCCATCATGCAGATTTGGTTTCTGAGCATGCTCTCAAGGATATTGAATCAATGATCCTAAGGATTAAAAGGTCTGTTCCAATTTTCTTTACAAAAATGGATCCGACGTACTTATTTGAGGTGGGAACTATCAATATCAAAATACCATTGACGGCTCTTCATGAAGCTACTGTATTATGTGTTTCTGCTGTTGGTTCTGCAGAGCCTTTTGTGAAGCAGATTCAAAAGATGGGAGCGCTTTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGAAATAATCAGAGCCAAACTTAGAGAACTAGAAGGGAAGTTTGGTTCTAAACCAATTGTTGTAATAACTGAAAAGGATTATGATAGGGACCCTGAAATTCTTAAGCAATTGTATCCATTTAAAGTTTTTGTTCTCTGTTCTGCGTTGAAGGTTCTACCCTATAGAGGAAGCACAGAGGATAGCTTTAAGAAATTTCTGAAGGACCACTTAAAATTCGAATGGCCTCCAGCACGTTAG 1194 0.4229 MEKVRRVVNEIAYAHTLSHLTPFHRSLLPFLSIASTLYKLALSLRRSLYRHRFFQVQRLPVRVISVGNLSWGGNGKTPMVEFIALCFSRYGISPLVLSRGYGGGDEVNMLRRHLLGTPTKFGIGANRAAVASHFIKKYGYIDICKSSWHEKQYLELKVQDSLYSEKIGVVVLDDAMQHWSLWRDLDIVMVNGLTLWGNLQLMPRGPLREPLTALRRADAVVIHHADLVSEHALKDIESMILRIKRSVPIFFTKMDPTYLFEVGTINIKIPLTALHEATVLCVSAVGSAEPFVKQIQKMGALYVDRIDFSDHHIFHARDIEIIRAKLRELEGKFGSKPIVVITEKDYDRDPEILKQLYPFKVFVLCSALKVLPYRGSTEDSFKKFLKDHLKFEWPPAR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01990 397 NCBIfam tetraacyldisaccharide 4'-kinase 35 346 IPR003758 GO:0005524|GO:0009029|GO:0009245
Phco11g01990 397 Pfam Tetraacyldisaccharide-1-P 4'-kinase 29 387 IPR003758 GO:0005524|GO:0009029|GO:0009245
Phco11g01990 397 Hamap Tetraacyldisaccharide 4'-kinase [lpxK]. 19 390 IPR003758 GO:0005524|GO:0009029|GO:0009245
Phco11g01990 397 PANTHER TETRAACYLDISACCHARIDE 4'-KINASE 1 390 IPR003758 GO:0005524|GO:0009029|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01990 Phco-Chr11 16228348 16231946 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01990 11 16228348 16231946 Phco11g01990 11 16228348 16231946 ECH