Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01978 ATGAACAAGTTTAAGAAATCTCAAGTTCTAGTGCTCTGTCTTCTAGTTGTTCTTCTTGTCATCACACCCTCTTTGCCTTCCTCTCTTAGGCCAACCTACTTGTATTTCATCATAAACTTCCTCATCATGGCACTTTGTGCTGAAGCTGGACTCCTTTCAGTTTTTTCTAGGCCTTCGGAGGATAAAAAGCAATCTTTGATGCCACCAGAAGCCACTTCTGAGAAAAGAGAAGGTTACAATTCCACCCCTATAGTTGTTGGTGCTGTCTCAGAACATGCTGAAAAGTCTGCATCTGAAAGGGTTGTTTGTGTCACCAAAGTGGACATGGTGCAAAGTTGTCCTTCAATGCCTAGCCTTTTCATCACAGGGGGTGGAGAAACTGATGAAGAAGTCATGGATGAAGAACTTGAAGCAGAAGAGGAGATGGGAGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAAGATGCAAATCATGATTGATGAAATGACCAACTTGAGGAATATCATAATATTGCTAAAGGGTATGGTGCTATTGGATCAATTTTCATGTCCAGAAGAACAAGGGCCAGTTAAGAACAAGGGCGAGTTACGAGGGTTTTAA 636 0.423 MNKFKKSQVLVLCLLVVLLVITPSLPSSLRPTYLYFIINFLIMALCAEAGLLSVFSRPSEDKKQSLMPPEATSEKREGYNSTPIVVGAVSEHAEKSASERVVCVTKVDMVQSCPSMPSLFITGGGETDEEVMDEELEAEEEMGGVNGQELFAKAEAFIGNFYKQLKMQIMIDEMTNLRNIIILLKGMVLLDQFSCPEEQGPVKNKGELRGF 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01978 211 PANTHER OS01G0532300 PROTEIN 1 168 - -
Phco11g01978 211 Pfam Cotton fibre expressed protein 148 168 IPR008480 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco11g01978 Phco-Chr11 16137643 16138726 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01978 11 16137643 16138726 Phco11g01978 11 16137643 16138726 ECH
Phco11g01978 11 16137643 16138726 Phco3g00240 3 1750925 1751482 PCT