Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01937 ATGGCCATGCTTCCCCTTACTAACCCAAGTTCAATTCGCCACAACGCATTATCTTCTTCTTCTTCTTGCTCTTCCTCTTTCGCTCTTAGAAACTGCGTTTCCCTGAACCCTATACCCAGAACGTGCGTCTCCGCATCCCCGCGACGCCCTCTCGCGTCCGTGAGGTGCTGCTCCTTCTCGACACCAGAGAGCGCCAAGATTAAGGTTGTTGGTGTCGGCGGCGGCGGGAACAATGCCGTTAACCGCATGATTGGTTGCGGATTGCACGATGTAGAATTTTATGCAATAAATACGGATGCTCAAGCACTATTGAATTCTGCTGCCGAGAACCCTATCAAAATTGGAGAGCTTCTGACTCGGGGATTAGGTACTGGGGGAAATCCACTTTTGGGGGAACAAGCTGCTGAGGAATCTAAAGAAGCTATTGCTAGTGCTCTTCAAGGATCTGATTTAGTGTTCGTAACTGCTGGCATGGGTGGGGGAACTGGGTCTGGTGCTGCCCCAGTTGTGGCCCGAATAGCAAAAGAGGCAGGTTACTTGACTGTAGGTGTTGTTACCTATCCCTTCAGTTTTGAAGGACGTAAAAGATCATTGCAGGCACTGGAAGCCATTGAAAAGCTGCAGAAAAATGTGGATACTCTTATAGTGATTCCAAATGACCGCCTGCTTGACATGGCTGATGAGCAGACACCTCTTCAGGATGCTTTCCGTCTAGCAGATGATGTTCTACGGCAAGGAGTGCAGGGAATATCAGACATCATAACAATACCTGGGCTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACAGCAATGCTTGGTGTGGGTGTTTCCTCCAGTAAAAACCGTGCTGAAGAAGCTGCAGAGCAGGCTACTTTGGCTCCTTTAATCGGCTCTTCTATTCAGGCAGCTACCGGAGTAGTGTATAATATTACTGGAGGAAAAGACATAACTCTGCAGGAAGTAAACAGAGTGTCTCAGGTGGTGACAAGTTTAGCTGACCCTTCTGCCAATATCATATTTGGTGCCGTTGTTGATGATCGCTACAATGGGGAGATTCATGTGACTATCATTGCAACTGGCTTCTCGCAGTCCTTCCAAAAGACACTACTAACAGATCCAAGGGCAGCAAAGTTGCTTGACAGAGTGCCTGAAGGCCAAGAAATCAAGGCAGCATCCTCTCCTCTCAAGTCCTCAAACTATCCAACAGTTGGATCTAGAACATCCCCACGAAAGCTCTTCTTTTAG 1266 0.4755 MAMLPLTNPSSIRHNALSSSSSCSSSFALRNCVSLNPIPRTCVSASPRRPLASVRCCSFSTPESAKIKVVGVGGGGNNAVNRMIGCGLHDVEFYAINTDAQALLNSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIASALQGSDLVFVTAGMGGGTGSGAAPVVARIAKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDMADEQTPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQAATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTDPRAAKLLDRVPEGQEIKAASSPLKSSNYPTVGSRTSPRKLFF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01937 421 PRINTS Cell division protein FtsZ signature 151 171 IPR003008 GO:0005525
Phco11g01937 421 PRINTS Cell division protein FtsZ signature 179 200 IPR003008 GO:0005525
Phco11g01937 421 PRINTS Cell division protein FtsZ signature 265 286 IPR003008 GO:0005525
Phco11g01937 421 PRINTS Cell division protein FtsZ signature 242 264 IPR003008 GO:0005525
Phco11g01937 421 Pfam Tubulin/FtsZ family, GTPase domain 66 226 IPR003008 GO:0005525
Phco11g01937 421 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 159 165 IPR017975 GO:0005525|GO:0005874|GO:0007017
Phco11g01937 421 SMART Tubulin_4 66 258 IPR003008 GO:0005525
Phco11g01937 421 Hamap Cell division protein FtsZ [ftsZ]. 62 411 IPR000158 GO:0003924|GO:0005525
Phco11g01937 421 MobiDBLite consensus disorder prediction 398 413 - -
Phco11g01937 421 Pfam FtsZ family, C-terminal domain 275 368 IPR024757 -
Phco11g01937 421 Gene3D Tubulin/FtsZ, GTPase domain 58 273 IPR036525 -
Phco11g01937 421 NCBIfam cell division protein FtsZ 62 375 IPR000158 GO:0003924|GO:0005525
Phco11g01937 421 CDD FtsZ_type1 82 367 IPR000158 GO:0003924|GO:0005525
Phco11g01937 421 ProSitePatterns FtsZ protein signature 1. 97 131 IPR020805 GO:0005525
Phco11g01937 421 SMART Tubulin_C_4 260 377 IPR018316 -
Phco11g01937 421 Gene3D - 274 379 IPR037103 -
Phco11g01937 421 FunFam Cell division protein FtsZ 1, chloroplastic 59 273 - -
Phco11g01937 421 FunFam Cell division protein FtsZ 1, chloroplastic 231 368 - -
Phco11g01937 421 SUPERFAMILY Tubulin nucleotide-binding domain-like 65 261 IPR036525 -
Phco11g01937 421 SUPERFAMILY Tubulin C-terminal domain-like 260 375 IPR008280 -
Phco11g01937 421 ProSitePatterns FtsZ protein signature 2. 150 171 IPR020805 GO:0005525
Phco11g01937 421 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 37 374 IPR045061 GO:0003924|GO:0005525
Phco11g01937 421 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01937 Phco-Chr11 15796258 15798806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01937 11 15796258 15798806 Phco11g01937 11 15796258 15798806 ECH