Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01901 ATGGCATCAAACCAGATCCTGAGAGAACTACAATGGGCTCAGCAAGCCATCAAATCAGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCCCAACCAACTTCAGGTTGTTACCAAGAAACAGAAAACTCCATAAGCATAAACATTTCCAAGGAAGACCTTCCATTCTTTTCCCCCCTCTTGACAACTCTAGCAGGACCAGGGAGACACAACTCCTCCTTGAGAAACTTGGAGTTCCACAAAGTTGAATGGGACTCACAACAGGTAAGACATCTTGGCACTTTGCTGGGGAATAACCAAAATGTACAACATTTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTCTCAGACCTTTCTGACATTCTGAAGGCAAATAGAGTGATCAAAGAGATCATGCTTTCAGAATCAGGCATAGGGTCTGTTGGAGCGGGACTCATTGCTTCTGCTCTTAGGGTGAATGACAGTTTGGAGGAGCTGCAGATATGGGAAGACTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCGAAGATGATTGAAGTTAACTCAACTCTAAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCTACACCTCTTATATCTGCAGTTTTGGCAAGGAACAGAAGAATGGAGGTTCATGTTTGGAGTGGGGAGAATAGGGAAAAGAGTTCCAAGGTGGTTGAGTTTGAACCTGATAACAGCACACTTAGAATTTACAAGCTTAACCTCTCAGGGACTTGTAGAGTTACCTGCTCTTTAGGCATGAACTTCACTGTGAAGTCCCTTGACATGACCGGAGTAAGGCTAAAATCCCGGTGTGCCAAGGAATTTAGGTTGGTTTTGGAACAAAACCAGAGCCTCAAAGAGGTAAACTTGTCTAGAACATGCCTTAAAGACAAGGGCATTGTGTATATTGCAGCAGGCCTCTTCAAGAACAGAACCCTGCAAACCTTACACCTGAATGGAAATTGGTTCAGTGGAATGGGTGTGGAGCATCTATTATGCCCTTTGAGTAGATTTTCAGCACTTCAAAGGCAAGCCAACATTACTTTGACATGTATTACTTTTGGAGGAGAAAGAACAAGAATAGGAAGGGATGGTCTAGCTGCTGTGTTACAGTTTCTTATAACAAATGAAACAGTGAGGCAGTTGGGAATTCACAATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTTCAAGGATGCAAACGTGTGGAGGGAGAGATACTGCTGAAGACAATTATGGAGACACTGCAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACAAAACTCTGGAAGGACTCAGCGGATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGATATGGATTCTGTTAAGGACATGCCTCTAACAGAACCCAAGAATTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACTGCACTTTGTCATTCAATATCACAAAATTTCTCTTCTTCGGCGCTTCCCTACTTGGATCAAGTCAGAACAATAGTGAACCCAGTGGAGCTGGCTGTCAAATCAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAACGATTTCAATATGGAATCTTGCTGGTCATCACGAGTTTATATCTCTCCATGATCTCATGTTCCCAGGGCATGGTAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCAAAAAGCTCAACAGAAATTGAAGATGACCTGCAGTATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGAGCAATACAACAATGCATGCTACCAAGTGTTGCTATTGTTCTCACACACTCTGACAAAATCAACCAACCATCACAAAATTTGCAGCGCACAGTAGAGTCAATCCAGAGACTTAGAGACAAGTTTCAAGGCTTTGTTGACTTTTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAACGACAAGCAAGACAATTCTCCAAAGAGTGCCTCGGGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCCATGAAGTGGAAGGAATTTGGTGAGCTATGTCAATTGAAAATTCCACCTTTGAGAATTCGATCAAGACATGACAACAAAGAGAAGGTAGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGAGAAGTGATTTATTTTGATGAATTAGATTTTCTAATTTTAGATTTTGAGTGGTTCTGTGGTGAAGTCCTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAACACTCCTCTGAAAACAATGGATTTATTAGCAGGAAGGAATTAGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGGTGTTTGAGAATTTAGACGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGGAAGATCCCTCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTTGAAGAAGGGAGAGGCAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGCGTTTACGCAGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGTTTCTTCCCTCGTTTACAGGTGCACCTTCACAATAGAATAAAGGCTGTCAAGGATCAGCATGGTGCAACTTACAGTCTTGAGAAGTACCTTATTTCAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGGGGACAGTTGGGTTACTATATTGATGTCCTAGCATGCTCCACCAAAAACTTGACCGAAACTTTAAGAGTCATTCATCAAATTGTAATCCCCGCAATCCAAAGTGTTTGCCATGGGATCACCTTGACTGAGAATGTCTTAAGACCTGAATGTGTGAGAAAATTGACACCTCCTAGATACAGAAAAACTCAATTTGCTTCTCTTCAGCAACTGAAAGAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAACACACATGGAGTTCAGTCCTAGACTCTGGTAGGCCTATTCTCCAAGATGGATTTGATTTTGCACGAGACCTTTTATCAGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATAACGACCTTTACAGTCTTGCACAAGAGCTGCAAGTTCCACCTGAAAACAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGAGATGAAGCTGCAAGGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGAGGTTTTGCAAAGACTCAAGATTATTGAGCAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATATTATGAACATAGACTTCTCCTTGAGCTTCATCGCAAAGTGAACCACCTTGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATATATTTTGTAAGGACAGAAAACTACACAAGGAGACTGGTCACCACCATGCTTTCTGGCATGAATGCTCTCCGGCTTCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGGTGGGGTGTGAAATCATGCAAGTTGATAATGCTGCTGTGAAGTCTTTGGCTCCATACATGAAGAAGTTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCTGCTGGAATGGGGCAAATGATACCTGACTTGAGTAAGGAGGTGGCTCACTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAAGTGCAGCTGGCGTTTTAGGTGCTGCCGCTATGGGTCGTAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTGAGGGAGAGGAATTGTTCCTCAGGGAAGGATATTGCAGAAAAGTTTGGACTGTGGCGAGTCAGGTACATGGACAACGGTCAAATTGCATGGATATGCAGGAGGCACATGTATGCAAGATCTGCAGAGATAAATGAAGTACCAATTTGA 4134 0.4216 MASNQILRELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETENSISINISKEDLPFFSPLLTTLAGPGRHNSSLRNLEFHKVEWDSQQVRHLGTLLGNNQNVQHLVFRRNRFNGKSLSDLSDILKANRVIKEIMLSESGIGSVGAGLIASALRVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRRMEVHVWSGENREKSSKVVEFEPDNSTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVRLKSRCAKEFRLVLEQNQSLKEVNLSRTCLKDKGIVYIAAGLFKNRTLQTLHLNGNWFSGMGVEHLLCPLSRFSALQRQANITLTCITFGGERTRIGRDGLAAVLQFLITNETVRQLGIHNDESLRSDDFVKIFKSLEKNASLKCLSLQGCKRVEGEILLKTIMETLQINPWIEDIDLSRTPLQNSGRTQRIYQRLGQNEKTEPDMDSVKDMPLTEPKNCRVFFCGQECAGKTALCHSISQNFSSSALPYLDQVRTIVNPVELAVKSVGMKIKTFKDEDTTISIWNLAGHHEFISLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEDDLQYWLRFIVSNSKRAIQQCMLPSVAIVLTHSDKINQPSQNLQRTVESIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRTTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQLKIPPLRIRSRHDNKEKVEMKRRAIATCLHHIGEVIYFDELDFLILDFEWFCGEVLGQLIKLNVRKQHSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEEDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKAVKDQHGATYSLEKYLISISINGIYIRVELGGQLGYYIDVLACSTKNLTETLRVIHQIVIPAIQSVCHGITLTENVLRPECVRKLTPPRYRKTQFASLQQLKEALLSLPAESMYDYQHTWSSVLDSGRPILQDGFDFARDLLSDDDFREVLHRRYNDLYSLAQELQVPPENNPEGQGQSITLRDEAARVEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVRTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQVGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGASAAGVLGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERNCSSGKDIAEKFGLWRVRYMDNGQIAWICRRHMYARSAEINEVPI 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01901 1377 Gene3D Ribonuclease Inhibitor 225 347 IPR032675 -
Phco11g01901 1377 Coils Coil 1124 1151 - -
Phco11g01901 1377 Pfam Leucine Rich repeat 287 310 IPR001611 GO:0005515
Phco11g01901 1377 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Phco11g01901 1377 SUPERFAMILY RNI-like 15 469 - -
Phco11g01901 1377 Coils Coil 1377 1377 - -
Phco11g01901 1377 PANTHER PROTEIN TORNADO 1 1 1376 - -
Phco11g01901 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 683 IPR027417 -
Phco11g01901 1377 Pfam C-terminal of Roc, COR, domain 755 924 IPR032171 -
Phco11g01901 1377 Gene3D Ribonuclease Inhibitor 348 478 IPR032675 -
Phco11g01901 1377 Gene3D Ribonuclease Inhibitor 61 218 IPR032675 -
Phco11g01901 1377 Gene3D - 490 694 IPR027417 -
Phco11g01901 1377 SMART LRR_RI_2 156 183 - -
Phco11g01901 1377 SMART LRR_RI_2 316 343 - -
Phco11g01901 1377 SMART LRR_RI_2 128 155 - -
Phco11g01901 1377 SMART LRR_RI_2 288 315 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01901 11 15368436 15373163 Phco11g01901 11 15368436 15373163 ECH