Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01893 ATGAACCCTGCTGATTGGGATCAAGAACTGAAAAAGTATCAGGATGTGATAGCTTCAGGTACCAAGAATATGAAAATAAAGGCCATAATGATGCTGGCTCGTTTTTCTAAGCATGCCCCTGAGCATGTTTTAGCTAGCACCATACCCATTCTCACTGAGATTCTTGGTCACAATGTTTTACATGACTCTGCTCCTTTACTTCAAGAGGCTGCTGCTTATTGCTTGAAGTGCATTGCTTGCAGGGGTGATGGTGCGTTGGCAGTTGAAATTGGTGGACATGGTGCCCCTCATTCTTTGATGAGGTTGTTGCCTCAGTCTGATGAAAGGATGCAGAAGGTCCTGATAAAATGCTTGCTGGTTATTGTTAGTTTTTGCAATGCAAGTAGGACAGTGGTTGCCACCAATGGTGGGGTGGAAGTGATAATTGGTTTGTTGGGTTCTTGCACCAATGATACTAGGAGGTATTTGTTGGAGATTTTGAGCGTGTTAGCATTGAGGAGGGATGTTAGGAAGATTCTCACTAGACTAAGAGCTCTTCACTATGTTGTGGAGGCTGCTAGTTTTGGTAGCATGGTGTCTAGGGAAAGGGCTTGTCAAGCAATTGGTTTGCTTGGAGTCACCAGACAGATTCGGCGTATGCTTGTTGAATTGGGAGCAATTCCAGTGCTTGTGTCGTTATTTCGTGATGGAGAACACTCCACAAAGCTTGTTGCTGGTAATTCTCTTGGTGTGATATCTGCTCATGTTGATTACATTAGGCCAGTTGCTCAAGCTGGGGCTATCCCCCTTTATGCTGAGCTTCTTGAAGGACCTGATCCTTCTGGGAAAGAGATAGCTGAGGATGTTTTTTGTATATTGGCTGTTGCTGAGGCTAATGCTGTTGAAATTGCTGGTCACTTGGTGAGGATTCTGAGAGAAGGTAATGATGAGGCAAAAGCTTCTGCGGCCGATGTGATGTGGGATCTGTCGGGTTACAAACATTCAATGTCTGTAGTCAGGGATTCAGGTGCAATTCCTATTCTTGTTGAGCTTTTGGAGAGTGGGAGTGAAGATGTGAAGGTGAACGTTTCTGGGGCATTTGCTCAACTGAGCTATGATGGAACTGATAGAATGTCACTTGCTGAGGCAGGGGCGATTCCAATTCTCATTGGCTTGATGAATGATGATGTTGATGAGGTCGAGGAACTAAGGGATAATGCTACAGAGACTCTTGTCAATTTTTATGAAGATCCATTGTATCATGATAGAGTGTCTCATGCAATTAACGTTTCTTCATTCAGAAATATGCAGAATAGGTTAGTTCATATTCGTGCATCGAATGAGCATATGGCTAGATCCTTGAGAAGAATGAGCGTTGAGCAGCTCACATGGAACCCAGATGTTGTATAA 1389 0.4377 MNPADWDQELKKYQDVIASGTKNMKIKAIMMLARFSKHAPEHVLASTIPILTEILGHNVLHDSAPLLQEAAAYCLKCIACRGDGALAVEIGGHGAPHSLMRLLPQSDERMQKVLIKCLLVIVSFCNASRTVVATNGGVEVIIGLLGSCTNDTRRYLLEILSVLALRRDVRKILTRLRALHYVVEAASFGSMVSRERACQAIGLLGVTRQIRRMLVELGAIPVLVSLFRDGEHSTKLVAGNSLGVISAHVDYIRPVAQAGAIPLYAELLEGPDPSGKEIAEDVFCILAVAEANAVEIAGHLVRILREGNDEAKASAADVMWDLSGYKHSMSVVRDSGAIPILVELLESGSEDVKVNVSGAFAQLSYDGTDRMSLAEAGAIPILIGLMNDDVDEVEELRDNATETLVNFYEDPLYHDRVSHAINVSSFRNMQNRLVHIRASNEHMARSLRRMSVEQLTWNPDVV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01893 462 SUPERFAMILY ARM repeat 11 410 IPR016024 -
Phco11g01893 462 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 336 378 IPR000225 GO:0005515
Phco11g01893 462 Gene3D - 297 456 IPR011989 -
Phco11g01893 462 Gene3D - 11 295 IPR011989 -
Phco11g01893 462 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 300 419 - -
Phco11g01893 462 SMART arm_5 366 409 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 325 365 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 248 288 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 83 123 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 207 247 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 125 165 IPR000225 GO:0005515
Phco11g01893 462 SMART arm_5 35 80 IPR000225 GO:0005515
Phco11g01893 462 Pfam Armadillo/beta-catenin-like repeat 331 364 IPR000225 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01893 11 15244418 15245806 Phco11g01893 11 15244418 15245806 ECH