Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01875 ATGAATGTGGGCGACCTCAACAAGGTATGGGAAATCAGAGCTCTGAAGAGGAAACCCGCGGCAGAAGAAGCGACGAAGATGTTGGAGAAGATCGCTAAACAGGTCCAACCCATCATGCGCAAACACAAATGGAGGGTCAAGCTCCTCTCTGAATTTTGCCCAGGAAATTCATCTCTCCTGGGGTTGAATGTTGGAGCTGGTATACATGTGAAGTTGCGGCTTCGGAGGCCGAACAGGGATTTGGACTTCTACCCATTTAATCAAGTTCTTGACACGATGCTTCATGAGCTTTGCCATAATGCCCATGGCCCTCATAATGCCAACTTCTACAAGCTTTGGGATGAGCTTAGAAAGGAATGTGAAGAGTTGATGGCTAAGGGAATAACTGGTGCAGGAGAGGGGTTTGACCTTCCAGGAAGGCGTTTAGGTGGTTATTCCCGGCAACCTCCACTTCCATCCCTCCGTAAAACTGCACTAGAAGCTGCAGAAAAGAGGGCACGATTGGGATCTCTTCTTCCATCTGGACCAAAACGTATTGGTGGTGATAGTGTTATAATGAAAGCCCTTAGTCCAGTACAAGCTGCTGCAATGGCTGCAGAGCAGAGATTACAGGATGAAATATGGTGTGGTTCTCAATCTTCCGCACATTTGGATGAGAAAGATGTTGATGATGATGATGCTGAGAACATTGTGCATAAGGGGGAAAATGTGGGAACCTCGAGACTAACGGACAATTCTGCTCTACCATCAAAGCTGTTATCTCAAAAAAGAAGTCAGGATACGGATTCAAGTTTACTTGTTGGCTCATCATCTAGTAGTCCTGAATTTATAGATTTGTCTATGGATACACCAAAAACTGGATCTAAACGAAGATGCTGTGGATCAGAAAGCATTTCACATTCTCAATCCAATTTTCAAGCAGGATCTAGTTCGGCAAATTTATCAAGTGTGACGGTATCTGGTGATAATAGAACATTTCGTTCTGATGAATCTGGAATGTGGGAGTGTACGATGTGCACTCTACTGAACAAAAAATTGGCTCCAATATGTGAGTTGTGTGGCACTCACCGGCCTAAAGATGTTAATACCAAATACAACACTTGGTCTTGCAAATTCTGTACGTTGGAGAACAATGTGAAGTTGGAGAAGTGCTCTGCCTGTGATCAATGGAGATACTCTCGTGGTCCACCAGTGTCAACCCTGGCACCTAACGTTGGGATAATGGTAGATGTGGCAAAACAAACACCAGCAAGGAGAGTTGCCACAACTGAGCAAGATTGTGATGTGTTCTTGAGCCACTGGCTAACATATCGTTGA 1317 0.4472 MNVGDLNKVWEIRALKRKPAAEEATKMLEKIAKQVQPIMRKHKWRVKLLSEFCPGNSSLLGLNVGAGIHVKLRLRRPNRDLDFYPFNQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMAKGITGAGEGFDLPGRRLGGYSRQPPLPSLRKTALEAAEKRARLGSLLPSGPKRIGGDSVIMKALSPVQAAAMAAEQRLQDEIWCGSQSSAHLDEKDVDDDDAENIVHKGENVGTSRLTDNSALPSKLLSQKRSQDTDSSLLVGSSSSSPEFIDLSMDTPKTGSKRRCCGSESISHSQSNFQAGSSSANLSSVTVSGDNRTFRSDESGMWECTMCTLLNKKLAPICELCGTHRPKDVNTKYNTWSCKFCTLENNVKLEKCSACDQWRYSRGPPVSTLAPNVGIMVDVAKQTPARRVATTEQDCDVFLSHWLTYR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01875 438 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 406 - -
Phco11g01875 438 SMART zf_4 332 356 IPR001876 -
Phco11g01875 438 SMART zf_4 366 390 IPR001876 -
Phco11g01875 438 SUPERFAMILY Ran binding protein zinc finger-like 329 357 IPR036443 -
Phco11g01875 438 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Phco11g01875 438 ProSiteProfiles Zinc finger RanBP2 type profile. 330 359 IPR001876 -
Phco11g01875 438 MobiDBLite consensus disorder prediction 253 279 - -
Phco11g01875 438 MobiDBLite consensus disorder prediction 253 289 - -
Phco11g01875 438 ProSiteProfiles Zinc finger RanBP2 type profile. 364 393 IPR001876 -
Phco11g01875 438 Pfam Zn-finger in Ran binding protein and others 331 358 IPR001876 -
Phco11g01875 438 ProSitePatterns Zinc finger RanBP2-type signature. 334 353 IPR001876 -
Phco11g01875 438 ProSitePatterns Zinc finger RanBP2-type signature. 368 387 IPR001876 -
Phco11g01875 438 Gene3D - 328 367 - -
Phco11g01875 438 Pfam WLM domain 8 203 IPR013536 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01875 11 15088635 15092607 Phco11g01875 11 15088635 15092607 ECH