Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01851 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTTGAATACTTCGACCCATCTCACGTTTTGCGAGAGAAAATAGATCAACTGGCTATTATGATAAAAAAGAGTAAGCATCTAGTGGTATTTACAGGTGCAGGAATATCAACTTCATGTGGTATACCGGATTTTCGAGGTCCCAAGGGAATATGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCAGAAGCATCACTGCCATTTCATCGAGCAGCACCAAGTTTGACACACATGGCTTTGGTTGAACTAGAAAAGGCTGGCATTTTGAAGTTTGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCCGGAATACCAAGGGAGAAATTATCTGAGTTGCATGGGAACTCCTTCATGGAGACGTGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACATCAAGGCGTTGTACAGTTGCCAAATGTGGAACAAGACTTAAGGATACTGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAGATGAATCCTGCTGAGAAGCACTGTAAACAGGCAGATATAGTGTTATGCTTGGGTACAAGTTTACAAATAACTCCAGCGTGTAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGCAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATTGTTCTAGTGCAAGCTTTGAGCAATGATAAAAGATATGTGAATTGGACTCTCCAGATTGCCAGTGCTCATGGACAAAGAGCGGCTTTGCCTTTCATCAAGTCTGTTGAGGTCTCCTTCTTGGACAGGGAAGATTACAAAGCTGCCATTCTAGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCGGTTGATTTTAAGGTTTCAACTGACTGTTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAAGCAGTTCTTGAATCAAGATGTGGTCAGAATGGTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGCCCTTGATTCTCTAAGTAATGGTGATCATAAAAAAAGAAAAGCTAGTGTGACTGGTATAGGATCATCTAGGAAGCGTTCAAAAGGGTCCTCCAAGTGTAAATCCTGA 1413 0.4197 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLSELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCTVAKCGTRLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFADKVIAGVMDQLNMQIPPFVRIDLFQIVLVQALSNDKRYVNWTLQIASAHGQRAALPFIKSVEVSFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNGVIERKTILTPRSDVTTYAIVTNVVQYSKTCKAALDSLSNGDHKKRKASVTGIGSSRKRSKGSSKCKS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01851 470 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 33 265 - -
Phco11g01851 470 MobiDBLite consensus disorder prediction 442 470 - -
Phco11g01851 470 FunFam NAD-dependent protein deacetylase SRT1 135 184 - -
Phco11g01851 470 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Phco11g01851 470 ProSiteProfiles Sirtuin catalytic domain profile. 27 267 IPR026590 -
Phco11g01851 470 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 36 134 - -
Phco11g01851 470 Gene3D - 135 184 - -
Phco11g01851 470 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Phco11g01851 470 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Phco11g01851 470 Gene3D - 36 262 - -
Phco11g01851 470 Gene3D YEATS domain 273 380 IPR038704 -
Phco11g01851 470 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01851 Phco-Chr11 14861666 14873416 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01851 11 14861666 14873416 Phco11g01851 11 14861666 14873416 ECH