Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01848 ATGAAGCCACCCAAACTTCCCACTCCGTCATTCTCACGTGCGCTCGCACGTGCCCTATGCCCCGCCACCACCACGCAATGTGATTCAGCGTTTCCTTTGAAGACGGTGACCACCGCCAATTTTGAACCATCGCTGGCGGAGCTCCGGCGCCACGTCCGGTCGTCGGACTTCGTGGCCATCGACCTCGAGATGAGCGGCATCACCAGCGCTCCCTGGCGCGAGTCACTCGAGTTCGACCGCTCCGACGTGCGCTACCTCAAGGTTCGAGACTCTGCCACCAAGTTCGCCGTCGTTCAATTTGGCGTTTGCCCCTTCCGTTGGGATTCCTCTAATAACTCCTTCGTCGCGTATCCGCACAGCTTCTATGTTTTTCCTCGACAGGAGCATGCAGGTCTGGGTCCGTGCGATGAATTTCTCTGGCAGACCACTTCGATGGATTTCTTGGCCAAATACCAGTTTGATTTTAATGCTTGCATACACGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGAAAGCATTAAGGAGTTTGAATTCTACGTATGATAGTGAGTGGTCTGACATTTGTAAATTAAAAGATGTTAGGGACATGCCGTTGCGCAGTGCAGCAGACATTTTGTTTACTGCACGAATGAAAGACATATTCCGTGAATGGCGTGATGGGTTGTTACATGAGCAAAATCTAGAAGACCAAATTAAAGGAGTTACTGGAGACTCAAAATTTCAAGAGATGTTTTTTGAGATGCATCCTGCTCTTAGGCTTAATGGATTCACCTCTCACCAGCTTAAATTGATTCAGTTGGTCATCAGAAAACACTTCAAAGATCTTTCTTATGTCAGCGTGAATAGGGAGGCTTCCAATTTACAGCAATTAGTTGTGTATACAGACTCAAAGGATGAATTAAACTCACTTCTGAAAAAAGTGAAAGAAGAAAATCACGGGGCAGAAAAGATGAAAATCCAAGCTGCTGTGGGACTTCGCCATGTGATTGATCTCCTTTCGTCGGAGCAGAAGTTGATTGTTGGTCACAATTGTTTTCTAGATCTTGCTCATGTCTACAGCAAATTTATAGGCCCCCTTCCTGATACTCCTGAAGAGTTTGTTACCTCTGTTAACAAGTGCTTTCCGCACATTGTTGACACCAAGATACTTCTTAACACTAATTTTATGCTCCAAGAAAAAATGAAAAGATCCAGAAAATCACTGGCAGCTGCATTCACGTCATTTTGCCCACAAATTGCAGCTGGCTCCACAAGCAGTTATCCAGGTTCACTCTCACATGTGAAAGTGGAAGTTGAAGTTGATGACGTGAGATCATCCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAATGATTTAGGTATCGATTACAAACTCCACGATTCTTCAAAACAATTAGGCCTTGATGAGAAACTGCAGAATTATGTTAATCGTCTATATCTTAGTTGGATGCATGGGGACATTATTGATCTAAGTACTGGTAATAAGGTTGCAGATTCTTCACCCAGCTATAGCCTCAGGAAGCGGTACCCAAAAATTTTGTTTGAAAACATTATTATTATTTGGGGATTTCCTTCTACGCTGAAGGCAAATGAAGTAAGAGAGTGCATATCTAAAGTATTTGGACCAACTTCTGTAGTTACTGTCTTCCACTTGGATGCAACTGCAGTATTCGTTCAGTTTAGCAAAACAGAACTAGTTTCTGATTTTCTTTCATTGAAGAACACCTTAGAGAGAAGTGATGGTGCACTCTTGGTTTTTCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGCTGCTAATTATGGTACTTATAAAGAAATTTGTGGTTCACCCTTATCAGAATGCCTGTTTGCTGATCAGGTAAAAGCAGTTGGTATAAAGTGGAAGACCAAATTGCCAGAATACAAGATAGCATTGGGGGCCGAAGAACATGAAAATCCAAGTGTAGGTAATGTAAATATTGCTATGGAGAATGTGAAAAGGACCAAGCCAAACACAATTGATCAATTGAGAAATGCTCCATTTCGGAGACAAGTCTCCACACATGAGGTTGAAGATTCTTGTGTTGCAGAAGCCAACTTGTGA 2142 0.4318 MKPPKLPTPSFSRALARALCPATTTQCDSAFPLKTVTTANFEPSLAELRRHVRSSDFVAIDLEMSGITSAPWRESLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDSSNNSFVAYPHSFYVFPRQEHAGLGPCDEFLWQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTYDSEWSDICKLKDVRDMPLRSAADILFTARMKDIFREWRDGLLHEQNLEDQIKGVTGDSKFQEMFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNREASNLQQLVVYTDSKDELNSLLKKVKEENHGAEKMKIQAAVGLRHVIDLLSSEQKLIVGHNCFLDLAHVYSKFIGPLPDTPEEFVTSVNKCFPHIVDTKILLNTNFMLQEKMKRSRKSLAAAFTSFCPQIAAGSTSSYPGSLSHVKVEVEVDDVRSSSWNPGGKHEAGYDAFMTGCIFAQLCNDLGIDYKLHDSSKQLGLDEKLQNYVNRLYLSWMHGDIIDLSTGNKVADSSPSYSLRKRYPKILFENIIIIWGFPSTLKANEVRECISKVFGPTSVVTVFHLDATAVFVQFSKTELVSDFLSLKNTLERSDGALLVFHPLSKLLEGGNTCAANYGTYKEICGSPLSECLFADQVKAVGIKWKTKLPEYKIALGAEEHENPSVGNVNIAMENVKRTKPNTIDQLRNAPFRRQVSTHEVEDSCVAEANL 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01848 713 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 36 625 - -
Phco11g01848 713 Coils Coil 292 319 - -
Phco11g01848 713 Gene3D - 264 511 IPR036397 GO:0003676
Phco11g01848 713 Gene3D - 35 193 IPR036397 GO:0003676
Phco11g01848 713 Pfam CAF1 family ribonuclease 36 462 IPR006941 -
Phco11g01848 713 SUPERFAMILY Ribonuclease H-like 34 474 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01848 Phco-Chr11 14842435 14846031 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01848 11 14842435 14846031 Phco11g01848 11 14842435 14846031 ECH