Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01817 ATGAAGATCACTGTCATGACTGCTGATGAGCAAATTCTCACATTGGATGTGGATCCCCATGAATCTGTGGAGAACGTCAAAGCATTGCTCGAGGTTGAGACTAGTGTGCCTCTTCAACAACAACAGCTTCTGTTCAATGGGAAGGAGGTGAGGAATTCTGAGAAGTTGAGTGCTCTCGGTGTTAAGGATGATGATTTGCTGATGATGGTGTCTGGCGCTGTGGCCGCCTCCGCGGCTTCTAGTGGGTCTACCAATGATTTGAGTTTGAATACTGATGGTTCGGCTGTCAACCCTAGTGCTTTCCAGCAGCACATAAGACGAGATTCTAATTTGATGGGTCAGCTCTTTCAGAGTGATCCAGAGTTGGCACAAGCTATTTTAGGGAATGATCTGAATAGATTGCAAGAAGTTTTGCGATTGCGTCATCACCAAAGAGATGAATTAAAGCGTCAGAAAGAAGAAGAACTTGCTCTTCTCTATGCTGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATCCGGCAGAAAGGGATTGATGAAAATTGGGCAGCTGCATTAGAACATAATCCTGAAGCTTTTGCTAGAGTGGTTATGTTGTATGTTGATATGGAGGTTAATGGTGTCCCATTGAAGGCATTTGTTGATAGTGGAGCTCAGTCTACCATTATATCAAAAAACTGTGCTGAGCGTTGTGGATTGCTGAGACTTTTAGATCAGCGATACAGAGGGATTGCTCATGGAGTTGGCCAGTCAGAAATATTGGGTCGTATACATGTAGCTCCAATCAAGATTGGGAGTATATTTTACCCATGCTCATTCTTGGTGCTTGACTCTCCCAATATGGAGTTTCTCTTTGGACTGGATATGCTCCGAAAACACCAGTGTATAATTGATTTGAAAGAAAGTGTTTTGCGAGTTGGAGGAGGAGAAGTTTCTGTGCCATTTTTACAAGAGAAAGATCTACCATCTCGGTTTTTAGACGAGGAGAGAGCTTCTGGCTCTGGTGGTCAAATTACACCAGGAAGCAATAATCCACCAACTGGAGGCCACCCTTCTGGAGGAGCTTCTAGTGACAAGGCTAAGGATTCTGAATTTGAAGGCAAAGTTGCAAAGCTTGTTGAGTTGGGATTTGAAAGAAATGCAGTTGTAGAAGCTCTGCAATTATTCAATGGCAATGAGGAACAGGCTGCTGGCTTTCTTTTCGGGGGATAG 1221 0.4365 MKITVMTADEQILTLDVDPHESVENVKALLEVETSVPLQQQQLLFNGKEVRNSEKLSALGVKDDDLLMMVSGAVAASAASSGSTNDLSLNTDGSAVNPSAFQQHIRRDSNLMGQLFQSDPELAQAILGNDLNRLQEVLRLRHHQRDELKRQKEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKNCAERCGLLRLLDQRYRGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKESVLRVGGGEVSVPFLQEKDLPSRFLDEERASGSGGQITPGSNNPPTGGHPSGGASSDKAKDSEFEGKVAKLVELGFERNAVVEALQLFNGNEEQAAGFLFGG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01817 406 Gene3D - 343 406 - -
Phco11g01817 406 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 403 - -
Phco11g01817 406 SMART ubq_7 1 72 IPR000626 GO:0005515
Phco11g01817 406 Pfam UBA/TS-N domain 372 402 IPR015940 -
Phco11g01817 406 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 363 406 IPR015940 -
Phco11g01817 406 SUPERFAMILY Acid proteases 187 302 IPR021109 -
Phco11g01817 406 SMART uba_6 368 405 IPR015940 -
Phco11g01817 406 ProSiteProfiles Ubiquitin domain profile. 1 70 IPR000626 GO:0005515
Phco11g01817 406 MobiDBLite consensus disorder prediction 331 366 - -
Phco11g01817 406 SUPERFAMILY Ubiquitin-like 1 82 IPR029071 -
Phco11g01817 406 FunFam DNA damage inducible 1 homolog 2 179 326 - -
Phco11g01817 406 Gene3D - 1 85 - -
Phco11g01817 406 Pfam Aspartyl protease 179 301 IPR019103 GO:0004190|GO:0006508
Phco11g01817 406 Pfam Ubiquitin family 3 70 IPR000626 GO:0005515
Phco11g01817 406 SUPERFAMILY UBA-like 346 406 IPR009060 GO:0005515
Phco11g01817 406 CDD RP_DDI 186 309 IPR019103 GO:0004190|GO:0006508
Phco11g01817 406 CDD UBA_scDdi1_like 369 404 - -
Phco11g01817 406 Coils Coil 134 154 - -
Phco11g01817 406 CDD Ubl_Ddi1_like 1 69 IPR033882 -
Phco11g01817 406 PRINTS Ubiquitin signature 32 52 IPR019956 -
Phco11g01817 406 PRINTS Ubiquitin signature 11 31 IPR019956 -
Phco11g01817 406 Gene3D Acid Proteases 180 326 IPR021109 -
Phco11g01817 406 MobiDBLite consensus disorder prediction 338 354 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01817 11 14533877 14541159 Phco11g01817 11 14533877 14541159 ECH