Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01814 ATGATGGCTTCCCCAAACAACCACCACTCCAACCCCAACCCCAACACCAACAACCACCTTTCTCCTCCTCCCTTCGACATGCACTCCTTCTTCAACCCTCCGCCCCCTTCCTCAAACCCTAACCCTAACCCTAGCCCTTCATCCTCATACCCTCCGCCCTTCTCCGCCGCCGCGCCCTTTCACTTCCCGGCCTTCGACCTCCCTCTCCACCCCCACCACCGCTCCCTCTCCTTCCCCACCCAGCCCATCCCTCCGCCCTCCAACCCCAACGCCGGCGCCCGCCTCATGGCCCTCCTTAGCAACCCCTCCCCCCCGCCCCCCGACTACGCGCCTCCCTCCTCTACCCCCTCTGCTGTCCTCGCCGCCGCCACTGCCGCCGCAGCCGCCCTCACGCGACTCCCCAGCGGCAAGGTCCCCAAGGGAAGGCACCTCTCCGGCGAGCGCGTCGCCTACGACGTTGACGTCCGGCTGCCTGGCGAGGTCCAGCCGCAGCTTGAGGTTGCTCCGATCACGAAATACGGGTCGGACCCTAACCCGGTTCTGGGGAGGCAGATTGCGGTGAATAAGTCGTATATATGCTATGGGCTGAAACAGGGGAACATTAGGGTGCTTAATATCCACACTGCTGTCAGGTCTCTCCTCAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTTTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGTCGAGTTTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCTTCAAATTACAGCCAATATTGTTATTGCTATTCAAATAGTGGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGTCATAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTTTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCGTTTGTGGCAGAGGATCCTCCTCTGAGATGTCCTGTTGACAAGCTCATCGATGGGGTTCAGCTGGTAGGCACGCATGATGGAGAGGTGACTGATTTATCTATGTGCCAATGGATGACCAATCGATTGGTATCTGCGTCACAGGATGGCACGATAAAGATCTGGGAAGATCGCAAGATACAACCACTTGAAGTTTTGAGACCACATGATGGACATCCAGTTTTTTCTGCTACATTTTTCACTGCTCCTCACCAGCCTGATCATATTGTCCTCATCACAGCAGGACCACAAAATCGGGAGGTGAAGCTTTGGGTATCCGCAAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACGTTGGAGTTGAAGAGTTCTGCTCAACAGTCTAGAGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTTCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTACATTTAGAATATGGTCCTAATCCAGAATCAACACGGATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATACTACCTCATGGTGAACATATTGTTCAGGTTTACTGTGTCCAGACACAGGCTATTCAGCAGTATGCTTTGGATTTAGCCCAGTGCTTGCCTCCACCATTGGATAATGTGGGACCAGAGAAGTCAGATTCCTGTGTTTCTGGGGATGCAGTTACTGTTGAAGGATTCCACAATTTAGACTCTTCTGCTCCCAAAATAATGTTACAAGCAGGTAGTACTGAAAGTGGACTTGTGGCCAGATACCCTTTAAGCTCTGGCCATGTTGAGGCACCTATTACAGGTTCAAACACTGAAGCTAAACCTGTTACATTAGCTCCTTCTAGTAGTGATCCTGATATTGTTTGTATTCCATCTCCACCTCTTCCTTTAAGCCCAAGGTTATCTAGGAAACTCTCTGATATCAGGAGTCCCCAGTCAAATTTGAGTGATCATGTTGGGGAACATCCTGTTAATGATTATTCCATAGACAGACAAATGGATACCATTCACAGAAACCTCTCTGAGACATTTAGTAGTGATTCAAAGAATGATGAGAAGAAAGTGAAACAGGATCACATTTCTAGTGTACTTAGTCCTTCTGTCATGTTTAAGCAGCCAACCCATCTAATCACACCATCTGAGATCACAAAGGCTGGTTCCTCAGAGAATAATATAGTTGATAGGAAGAGTGAGGGAGAAGCAAAGATCCAGGATGTGGGTAATGCTGAAGTGGAAGTGAAGGTGGTGGGTGAGACAAGATCTAATCAAATTGATGAATTTGGTCATCAAGGGTCACAACAAAATCCAATTTCTGACAGTAAAGAAAAAATATTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGGCTCGAGAAGGCTGTGTGATAGCTGCTGGGGACACATACCTTACAGAGGAACCTGGACAAATTGATTCAATGGGAGCGGTGTCACCAGCTCAACCTCCTGATACTGGTGAGGATGGACTCCAAGATATGGCAAAAGATGCCCATGAAAAGGTTCCTGACTCATCTACATCTGTGGCAGTGCCACCATCTCCTGTGCCTAATGCAAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAAGCATCTGGCCTACCTTCCTCATCTCCAAGTGTGTTTAATTCAACTGATTCATCCAATGAACCAAATGGAAATTCTAGCCTTCCATCTGCTGAAAATGCTCAAATTCTGGCAATGCAAGAATCAATCAATCAGTTACTGACGATGCAAAAGGAGATGCAAAAACAAATGACAATGATGGTTGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGAAACATGGAAAAAGCTGTCAAGGCCAACAGTGATGCTTTATGGGCTAGAATCCAGGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAGCAAATTACAGGTCTGATTAGTAACTTTATGAATAAAGATCTACCAGCAATACTGGAGAAAACAGTAAAGAAGGAAATGGCCTCGGTTGGGCAAGCAGTAGTACGTGCAATGTCTCCTGCTGTAGAGAAAATAATATCTTCTGCTATTGTTGAATCCTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAACCAACTTGATAAATCAGTTAGTTCAAAACTGGAAGCTACCGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAAACATCAGCTGTTCCTGCATTTGAAATGTCGTGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGCTGAACATTCAGCTGCTGTGCAGCAACGCCTTGAATCTGCACCCACTTCTTTGGCAATGACACTAAGGGATTCCATTAATTCAGCATCATCAATTTCTCAAACTTTGAGTAGAGAAGTGCTCGAGGGCCAGAGAAAGCTAGTAGCACTCGCAGCTACAAGAACAAGCTCAGGCTCGTTAAATCCTTTGCCGGTCCAGCTGAACAATGGTCCTTTACTTCATGAAAAGGTTGAGGTTCCCCTGGATCCTACACAGGAGCTAGCAAGGTTGATTTCTGAACGGAAATACGAGGAGGCTTTCATTGGAGCTCTACATAGAAGTGATGTATCCATTGTATCATGGTTATGTTCTCAGGTTGATTTACATGGACTCTTGTCAATAGTTCCTCTTCCTTTAAGTCAAGGTGTACTGCTCTCATTGCTGCAGCAACTGGCCTGTGACATTAACAACGACACACCACGAAAGATCGCATGGTTAACAGATGTGGCATCTGCCATAAACCCATCGGATCCAGTGATTGCGATGCACACACGGCCCATCTTTGAGCAAGTCTTCCAGATACTCAATCATCAACGTAACTTGCCTACAATGACTGGAACTGATCTCTCTAGTATCCGTCTGTTATTGCATGTCGTCAACTCCATGCTCATGACATGTAAATGA 3990 0.4659 MMASPNNHHSNPNPNTNNHLSPPPFDMHSFFNPPPPSSNPNPNPSPSSSYPPPFSAAAPFHFPAFDLPLHPHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPPPDYAPPSSTPSAVLAAATAAAAALTRLPSGKVPKGRHLSGERVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKLQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFVAEDPPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKIQPLEVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQQSRDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLDNVGPEKSDSCVSGDAVTVEGFHNLDSSAPKIMLQAGSTESGLVARYPLSSGHVEAPITGSNTEAKPVTLAPSSSDPDIVCIPSPPLPLSPRLSRKLSDIRSPQSNLSDHVGEHPVNDYSIDRQMDTIHRNLSETFSSDSKNDEKKVKQDHISSVLSPSVMFKQPTHLITPSEITKAGSSENNIVDRKSEGEAKIQDVGNAEVEVKVVGETRSNQIDEFGHQGSQQNPISDSKEKIFCSQASDLGIEMAREGCVIAAGDTYLTEEPGQIDSMGAVSPAQPPDTGEDGLQDMAKDAHEKVPDSSTSVAVPPSPVPNAKGKRQKGKNSQASGLPSSSPSVFNSTDSSNEPNGNSSLPSAENAQILAMQESINQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKANSDALWARIQEENAKNEKLLRDRIQQITGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQEALKSSFETSAVPAFEMSCKAMFEQVDATFQKGMAEHSAAVQQRLESAPTSLAMTLRDSINSASSISQTLSREVLEGQRKLVALAATRTSSGSLNPLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCSQVDLHGLLSIVPLPLSQGVLLSLLQQLACDINNDTPRKIAWLTDVASAINPSDPVIAMHTRPIFEQVFQILNHQRNLPTMTGTDLSSIRLLLHVVNSMLMTCK 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01814 1329 ProSiteProfiles Trp-Asp (WD) repeats profile. 334 367 IPR001680 GO:0005515
Phco11g01814 1329 MobiDBLite consensus disorder prediction 864 899 - -
Phco11g01814 1329 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 167 479 IPR032401 -
Phco11g01814 1329 Gene3D - 170 520 IPR015943 GO:0005515
Phco11g01814 1329 MobiDBLite consensus disorder prediction 1 52 - -
Phco11g01814 1329 MobiDBLite consensus disorder prediction 27 52 - -
Phco11g01814 1329 Gene3D - 1241 1328 IPR044938 -
Phco11g01814 1329 MobiDBLite consensus disorder prediction 811 899 - -
Phco11g01814 1329 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 334 367 - -
Phco11g01814 1329 FunFam enhancer of mRNA-decapping protein 4 166 480 - -
Phco11g01814 1329 MobiDBLite consensus disorder prediction 73 116 - -
Phco11g01814 1329 FunFam Enhancer of mRNA-decapping protein 4 1241 1327 - -
Phco11g01814 1329 SUPERFAMILY WD40 repeat-like 183 443 IPR036322 GO:0005515
Phco11g01814 1329 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 214 251 - -
Phco11g01814 1329 SMART WD40_4 207 247 IPR001680 GO:0005515
Phco11g01814 1329 SMART WD40_4 330 367 IPR001680 GO:0005515
Phco11g01814 1329 MobiDBLite consensus disorder prediction 602 621 - -
Phco11g01814 1329 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 2 1327 IPR045152 GO:0031087
Phco11g01814 1329 MobiDBLite consensus disorder prediction 1 23 - -
Phco11g01814 1329 ProSiteProfiles Trp-Asp (WD) repeats profile. 214 256 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01814 Phco-Chr11 14505385 14514037 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01814 11 14505385 14514037 Phco11g01814 11 14505385 14514037 ECH