Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01811 ATGGAGACTCGAGTTGAAGGGAAACCTACTGGTGAGGAAATGGGTACTCCAAATGGAAGAGCAATGCACAAGTCCGATGATGAAATTCCTTTTGATTCCGAAATAAATTTTCACCTGTCAGAATCTAGTCTGGTGGAGGTACGTGGATCACATTCTGGAGAATCTCAGACTGTTCATCATGAAACGTTGGCGGGTATTGTTTATAGGAGCATAAAAGTTGTGATTTTCTCCAACAAACTCAACTTGCTTATGCCTTTTGGGCCTGTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTCTGAGTTTGTTAGGTATCATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTTATCATCTCAATATATGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTATCTTTGCTGGGATCAATTTTGTCCAATATGTTATTGGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTGAATCATAAGAAGGAGCAAGTGTTTAACAAGGCAACTGCTTCTGTGAATTCAGGATTATTGTTGATGGCAGTAATGGGCATACTTTTTCCAGCTGTTCTACACTACACGCACACTGAGGTTCGTGTTGGGAAGTCAGAGTTGTCCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTATTTTTTCAGTTAAAGAGTCAAAGAAGTCTCTATGTCTCTGTGAACGAGGAAGAGGGTCAGAGTGGAAACAACTCAAATGATGACGAATCACCGGATATTTCTAAATGGGAATCAATAATATGGCTTTCCGTTTTGACTGCTTGGATATCAATCTTGTCCGAATATTTGGTTGGCGCTATCGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCGCTAGTGGGGAATGCAGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGGGTTGCAATAGGCTCATCCACACAAATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCACCCTATGGACTTAAACTTTCAGCTTTTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTTATAGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 1326 0.414 METRVEGKPTGEEMGTPNGRAMHKSDDEIPFDSEINFHLSESSLVEVRGSHSGESQTVHHETLAGIVYRSIKVVIFSNKLNLLMPFGPVAILVQKLTAHLGWVFALSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATEFIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELSLSRFSSCVMLVAYAAYLFFQLKSQRSLYVSVNEEEGQSGNNSNDDESPDISKWESIIWLSVLTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01811 441 Pfam Sodium/calcium exchanger protein 292 432 IPR004837 GO:0016020|GO:0055085
Phco11g01811 441 Pfam Sodium/calcium exchanger protein 100 257 IPR004837 GO:0016020|GO:0055085
Phco11g01811 441 Gene3D - 278 435 IPR044880 -
Phco11g01811 441 Gene3D - 129 270 IPR044880 -
Phco11g01811 441 FunFam Vacuolar cation/proton exchanger 131 270 - -
Phco11g01811 441 NCBIfam calcium/proton exchanger 70 433 - -
Phco11g01811 441 NCBIfam calcium/proton exchanger 84 434 IPR004798 GO:0006816|GO:0015369
Phco11g01811 441 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 52 438 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phco11g01811 441 MobiDBLite consensus disorder prediction 1 23 - -
Phco11g01811 441 FunFam Vacuolar cation/proton exchanger 279 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01811 Phco-Chr11 14469661 14474469 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01811 11 14469661 14474469 Phco11g01811 11 14469661 14474469 ECH