Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01426 ATGAACCTTTCTCATCTTTCCTCTGCTTCTCATAGAACGCAAAACATGGATAACAAAACCACTGAACCAAACGATTTTTCAACCCCTCTTCTCCCTACGAGTTATGGTGCCCATGATGTTGGCGTTGACTTTCTGGAAAAGAGGCATAACGGAGCTTCTCCCGTTCCAACTACTCTTATACTCACCACCCTCGTTGCTGTTTTTGGTTCCTACGTTTTTGGCTCTGCTATTGGGTATTCATCGCCTACTCAATCTGGAATCATGCGTGATCTCAATCTCGGAGTGGCTCAGTACTCAATTTTTGGTTCGATATTGACTATTGGAGCTATGATCGGTGCTGTTGTTAGTGGTAGAATAGCAGATTATGCAGGTCGTCGAGTTGCCATGGGATTCTCTCAGATTTTCTGCATCTTGGGATGGTTGGCCATAACATTCTCAAAGACTGCTTGGTGGCTTTATGTTGGAAGACTGTTGATAGGATGTGGGATTGGCCTTCTATCTTATGCGGTACCTGTTTTTGTAGCAGAAATAACACCCAAGAATCTTCGAGGGGCATTCACTGCAGTTCATCAGTTAATGATTTGTTGTGGGATGTCATTAACTTATCTTGTTGGAGCATTTGTCAATTGGAGGATCTTAGCTCTAATAGGAATTATTCCGTGCCTTGTGCAGCTTCTCAGTCTGCCCTTCATTACTGATTCTCCCAGGTGGCTGGCCAAGGTGGGTCGGTTAAGAGAGAGTGATTCTGCTTTACAGCACCTCAGGGGTAAGAATGCTGATGTTTATCAAGAGGCCACTGAAATTAGAGATTATACCGAAGCCTTTCAGAAGCAAACAGAAGCTAGCATCATTGGCTTATTCCGAATACAATATTTGAAGTCACTTATCGTAGGAGTCGGCTTGATGATACTTCAACAGTTTGGAGGGATTAATGGCATTGTTTTTTATGCAAACTCTATATTTATATCTGCTGGGTTTTCGGAAAGTATTGGAACAGTAGCAATCGTTGCTGTCAAGATTCCAATGACAACTTTAGGAGTACTTCTAATGGATAAATCTGGAAGAAGACCACTTCTGCTGGTGTCTGCAGTGGGAACATGCTTAGGATGCTTCCTGGCAGCCGTGTCATTCATCTTGCAGGACTTACATCAATGGAAGGGAGTTAGTCCCATTATGGCCCTAGTGGGTGTACTGGTATATGTGGGATCTTACTCTATAGGCATGGGAGCAATTCCATGGGTTATAATGTCTGAGATATTTCCCATCAACGTGAAGGGTTCTGCTGGAAGCCTTGTGACTTTGGTTAGCTGGTTGTGTTCTTGGATTGTGTCATATGCTTTTAACTTCCTCATGAATTGGAGTTCATCAGGAACTTTCTTCATCTTCTCCACCATATGTGGCTTCACTGTGCTATTCGTAGCAAAACTCGTACCAGAGACCAAGGGGCGAACATTAGAAGAAATTCAAGCTTCTTTGAGTTCATATTCTTCTTCAAAGAAATGA 1503 0.4285 MNLSHLSSASHRTQNMDNKTTEPNDFSTPLLPTSYGAHDVGVDFLEKRHNGASPVPTTLILTTLVAVFGSYVFGSAIGYSSPTQSGIMRDLNLGVAQYSIFGSILTIGAMIGAVVSGRIADYAGRRVAMGFSQIFCILGWLAITFSKTAWWLYVGRLLIGCGIGLLSYAVPVFVAEITPKNLRGAFTAVHQLMICCGMSLTYLVGAFVNWRILALIGIIPCLVQLLSLPFITDSPRWLAKVGRLRESDSALQHLRGKNADVYQEATEIRDYTEAFQKQTEASIIGLFRIQYLKSLIVGVGLMILQQFGGINGIVFYANSIFISAGFSESIGTVAIVAVKIPMTTLGVLLMDKSGRRPLLLVSAVGTCLGCFLAAVSFILQDLHQWKGVSPIMALVGVLVYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIVSYAFNFLMNWSSSGTFFIFSTICGFTVLFVAKLVPETKGRTLEEIQASLSSYSSSKK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01426 500 ProSitePatterns Sugar transport proteins signature 1. 116 132 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 SUPERFAMILY MFS general substrate transporter 63 489 IPR036259 -
Phco11g01426 500 FunFam sugar transporter ERD6-like 6 53 492 - -
Phco11g01426 500 PANTHER - 56 489 - -
Phco11g01426 500 NCBIfam sugar porter family MFS transporter 62 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 Gene3D MFS general substrate transporter like domains 52 494 IPR036259 -
Phco11g01426 500 MobiDBLite consensus disorder prediction 1 29 - -
Phco11g01426 500 CDD MFS_GLUT6_8_Class3_like 60 487 IPR044775 GO:0008643|GO:0051119
Phco11g01426 500 ProSiteProfiles Major facilitator superfamily (MFS) profile. 62 481 IPR020846 GO:0022857
Phco11g01426 500 PRINTS Sugar transporter signature 70 80 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 PRINTS Sugar transporter signature 394 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 PRINTS Sugar transporter signature 417 429 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 PRINTS Sugar transporter signature 305 315 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 PRINTS Sugar transporter signature 153 172 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco11g01426 500 Pfam Sugar (and other) transporter 63 490 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01426 Phco-Chr11 10838929 10843020 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01693 2 47301183 47305200 Phco11g01426 11 10838929 10843020 ECH
Phco11g01426 11 10838929 10843020 Phco11g01426 11 10838929 10843020 ECH