Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01322 ATGACCTGCTTTCTATCATGTTTTTCTACTTCTAAACGTCGCAACCAATTGCGTTCTAAGGATGCAACTCACTCACAAACCCATGTGGGAGAAGGAGCTGTTGAACCTCTTGCACGGCAGAAGACTGCTGTTGAAGAACTCATTGATTGCATAGCAGAATCAAAAATAAAAAATGAAGAGCAATTAAATAGCAGTGCTGAAATCAAGGAGGAGCGGGAGAAGGCGTCAAGAGAAGGGGAAGCACCTCAGATAGATGAGAAGAAGGATGAGCATGAAGGAGATGATGAGATCAGTCAAAGATTGCATCAGGAAGAGTCTTCGGAGTCACTGTTCTCTCTGTCCGTTTGTTCTAGAAAAAAAGTTTCCGATGCCGAAACAGTCGAGCCTGAAGTTAATAGTCCAATACAACTGGTATGCACAAGAGAGGTATCTCAAGCATTGGGGTCATCCCGAAATGCACCAGCTCAAAATGTTTCGCCCGTTCTGAGTCCAACTGAAAAATTTACCAGTGAAAATCCATCCAAGGAGAAGGAAGAAGAATATTCTGGCAAGGGACTAATCGAGAAGTTGGACTATAACGAAGGAGAAAAAGGGAAAGCGACTCACCCTGTCCTTCAGCATAGGTATAGAGATTGCCCCTATGACGAATACGATGACGTTAATTTAGATGCAAGTGATTTGGATTCTATGCTTGAAGATGATGATCCTCACAGTGGGAAGAGAGAAAGGGGGGAAGAAGGCACTGTTGTTAACCGAACATGGGTTCAAGAAGAGTCTTCGGAATCTTTGTTTTCTCTATCTGCTGATTCTAGAATACGAATTTCATCAGCTGAAGCAGAGAATGAAGTTGACAGCCTAGTGTCAGCCTACGGTACCAACCGCATCACACAAAAAGAAGCACAAGGAAGGATTCCAGATGTTTCCTCAGTGATGAATCCAATCAAGAATCTTACCAAAGGGAGGGCAGTCAAAGCAACAGAAGAGCATCCACTGAAGATCGATAAAGAAAACATCAAGTTGGTAGTGCAAGATGCTAACATACCCGTTAGTCCAGAGCCTACTTTGAAGCTGTCAAATCCCAAGGCTAGGCAGTTCAGTGACAACAAAAGAAGGCAAGAAATTGGGGTAGACACCAGCCTCTCGAGCTGGTTGGTTGAATCGGAAACCACGCCTGTTTCCATTAATAGTACCAGTTCTGTAGGAGAACAGACACCAAAAGGAAGAAGAGGTTCACCGTGGAGTCACGAGGATAGGCCAATTTTAGGAGCATTAACAGTTGAAGAGATCAGGATGTATTCTTTATCTGCACCTTCAAGAAGGTTTAGAAGCCGGAGTCCGGACGAGACACCCATCATAGGTACTGTTGGAAGCTACTGGACTCACACAGAACAGAGCATGGATTTTCGATTCAACAAAACAGGAAAGGATGTAACAACACCAAAGAGGAGTTCAACGGCATTACAAACCAGACTACTAGGAGCATTTGATGCTAGTGTATAA 1500 0.4373 MTCFLSCFSTSKRRNQLRSKDATHSQTHVGEGAVEPLARQKTAVEELIDCIAESKIKNEEQLNSSAEIKEEREKASREGEAPQIDEKKDEHEGDDEISQRLHQEESSESLFSLSVCSRKKVSDAETVEPEVNSPIQLVCTREVSQALGSSRNAPAQNVSPVLSPTEKFTSENPSKEKEEEYSGKGLIEKLDYNEGEKGKATHPVLQHRYRDCPYDEYDDVNLDASDLDSMLEDDDPHSGKRERGEEGTVVNRTWVQEESSESLFSLSADSRIRISSAEAENEVDSLVSAYGTNRITQKEAQGRIPDVSSVMNPIKNLTKGRAVKATEEHPLKIDKENIKLVVQDANIPVSPEPTLKLSNPKARQFSDNKRRQEIGVDTSLSSWLVESETTPVSINSTSSVGEQTPKGRRGSPWSHEDRPILGALTVEEIRMYSLSAPSRRFRSRSPDETPIIGTVGSYWTHTEQSMDFRFNKTGKDVTTPKRSSTALQTRLLGAFDASV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01322 499 MobiDBLite consensus disorder prediction 170 186 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 224 254 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 387 418 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 231 248 - -
Phco11g01322 499 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 184 465 IPR039300 GO:0007142
Phco11g01322 499 MobiDBLite consensus disorder prediction 59 103 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 387 405 - -
Phco11g01322 499 ProSiteProfiles Intein N-terminal splicing motif profile. 265 333 IPR006141 GO:0016539
Phco11g01322 499 MobiDBLite consensus disorder prediction 59 114 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 146 169 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 146 186 - -
Phco11g01322 499 Coils Coil 58 78 - -
Phco11g01322 499 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01322 Phco-Chr11 10007392 10009346 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01082 6 10923031 10924630 Phco11g01322 11 10007392 10009346 ECH
Phco2g01884 2 49471360 49473020 Phco11g01322 11 10007392 10009346 ECH
Phco11g01322 11 10007392 10009346 Phco11g01322 11 10007392 10009346 ECH
Phco11g01322 11 10007392 10009346 Phco6g01082 6 10923031 10924630 PCT