Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01315 ATGTGTCTCTTGAGCTATGATACACGTATATGTTTATATAGAAGCTTCGTTGGTGGTGGATCCTTCTACTTCAACCTACCACCACAAAATCAACCTCCCTCTACACAAGATCCGACTCAAATCCAAATCAACAACCATCAGATCTTTGCAATGGAGAGCCTGCCATCCCCAAGAACAACAACTTCAAGCAGCACCAACGGCGGCGGTAGTAGTACTCCGAGCAGGTACGAGAACCAGAAGCGGCGAGACTGGAACACGTACAGCCAGTACCTGCGGAACCACCGGCCGCCGCTGACGGTGGCGATGTGCAGCGGGGCGCACGTGCTGGAATTCCTGCACTACCTGGACCAATTCGGGAAGACGAAGGTGCACAACCCGACGTGCCCGTTCTTCGGGCTGCCTAACCCTCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCATGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCAGAGCCGAAAGCAACCCCTTCGGCGCCCGCGCTGTGAGGCTGTACTTGCATGATGTGCGGGAGTTTCAGGCGAAGGCGAGAGGAGTTAGCTACGAGAAGAAGAGAAAGAGGCCAAAGTCCAATATCTCTAATGCAGCTCCTGTTACCACTTCCCCCAATGCCACTGCCACTGCCACTTAG 681 0.5756 MCLLSYDTRICLYRSFVGGGSFYFNLPPQNQPPSTQDPTQIQINNHQIFAMESLPSPRTTTSSSTNGGGSSTPSRYENQKRRDWNTYSQYLRNHRPPLTVAMCSGAHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAESNPFGARAVRLYLHDVREFQAKARGVSYEKKRKRPKSNISNAAPVTTSPNATATAT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01315 226 ProSiteProfiles ALOG domain profile. 75 202 IPR006936 -
Phco11g01315 226 MobiDBLite consensus disorder prediction 52 75 - -
Phco11g01315 226 Pfam ALOG domain 71 188 IPR006936 -
Phco11g01315 226 MobiDBLite consensus disorder prediction 52 79 - -
Phco11g01315 226 MobiDBLite consensus disorder prediction 209 226 - -
Phco11g01315 226 PANTHER PROTEIN G1-LIKE2 59 209 IPR040222 -
Phco11g01315 226 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01315 Phco-Chr11 9954367 9955429 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01858 2 49199201 49200087 Phco11g01315 11 9954367 9955429 ECH
Phco6g02051 6 40596629 40597552 Phco11g01315 11 9954367 9955429 ECH
Phco11g01315 11 9954367 9955429 Phco11g01315 11 9954367 9955429 ECH
Phco11g01315 11 9954367 9955429 Phco6g01060 6 10632355 10633264 PCT