Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01299 ATGGTTTGTTTGAAGGGAAATATTAATGGCGAAGTGTATGGTGGCAGATGCACATTGAAGAACTGCAATAAAAAGGCCTTCATTTTCAGTTGGACTCAAACACAAATAATGTCTTCTGCTCCTCCTACTCACCACCACCTTCTCCTTCTTGCTTTCCTCTTCCCCCTCCTTCTACAAACCGTTCAGGTTCAATCCAGCAACCTTAACTACACAACAGACAGGAAAATCAGCAGCTTGAGACTCCAAAGGATTCAGAGACACTTGGACAACATTAACAAGACCCCTCTCCTCACCATACAGAGTCCAGATGGTGATCTCATAGACTGTGTTCACAAAAGAAAGCAACCTGCTTTAGATCACCCCCTTTTGAAGAATCACAAGATCCAGAGAGTAGCAAGTGAGATGCCTAAGGGTATGAAGGTGAGGGAAAAGAGTGAGATGGGAATGCAAGAGTGGCACCAAAATGGGACGCTGTGTCCAAAAGGAACCGTTCCCATACGGCGGAGCACGGTGCATGACGTGTTGAGAGCAAAGTCTTTGTTTGACTTTGGAAAGAAACGACGACGCTTCTCTCTCGCACGCAGCGACGCCCCCGATGTTGTCTCCGGCAATGGCCACGAGCATGCAATCGCATACACTGGATCAGCACAGGAGGTGTATGGGGCAAAGGCAACCATAAACGTGTGGGAACCTTCTATCCAAGTAGTGAACGAATTCAGTCTCTCTCAAATTTGGATTCTTTCTGGTTCATTCGATGGCTCAGATCTTAACAGCATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACACCAGACCCAGATTATTCACTTACTGGACGAGTGACTCCTATCAAGCAACAGGATGCTATAATCTTCTTTGTGCTGGTTTTGTGCAAACAAACAGCAGAATAGCCATTGGAGCTGCCATTTCCCCCATCTCATCTCCCGATGCTAACCAATACGACATCACCATCCTAATTTGGAAGGACCCCAAAATAGGGAATTGGTGGATGAGTTTCGGTGATGGCACACTGGTGGGGTATTGGCCAGTAGAGTTATTCACACACTTAGCCACACATGCGACCATGGTGGAGTGGGGTGGCGAAGTGGTGAACACACGTGCGAATGGGCAACACACCTCCACCCAAATGGGATCTGGCAACTTTGCTGGAGATGGTTTTGGAAAAGCAAGCTATTTTCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGAACAACATCTTAACCCTAACTGAGAACACCAATTGTTATGACATCAAGAGTTCCTATAGTAACGAATGGGGCACATACTTCTACTACGGTGGCCCAGGCAACAGTCCTCAGTGCCCCTGA 1371 0.4726 MVCLKGNINGEVYGGRCTLKNCNKKAFIFSWTQTQIMSSAPPTHHHLLLLAFLFPLLLQTVQVQSSNLNYTTDRKISSLRLQRIQRHLDNINKTPLLTIQSPDGDLIDCVHKRKQPALDHPLLKNHKIQRVASEMPKGMKVREKSEMGMQEWHQNGTLCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVSGNGHEHAIAYTGSAQEVYGAKATINVWEPSIQVVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDTRPRLFTYWTSDSYQATGCYNLLCAGFVQTNSRIAIGAAISPISSPDANQYDITILIWKDPKIGNWWMSFGDGTLVGYWPVELFTHLATHATMVEWGGEVVNTRANGQHTSTQMGSGNFAGDGFGKASYFRNLEIVDTDNSLSSVNNILTLTENTNCYDIKSSYSNEWGTYFYYGGPGNSPQCP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01299 456 Gene3D - 230 344 - -
Phco11g01299 456 Pfam Neprosin activation peptide 98 212 IPR025521 -
Phco11g01299 456 Pfam Neprosin 237 449 IPR004314 -
Phco11g01299 456 FunFam Putative carboxyl-terminal proteinase 228 348 - -
Phco11g01299 456 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 84 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01299 Phco-Chr11 9760029 9764183 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01299 11 9760029 9764183 Phco11g01299 11 9760029 9764183 ECH