Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01285 ATGGCAGCGTGGGGTGCACATTCGATATTGTTATCCCATGGGGAAGGCACAGGCACTCCCAATGTATCTGTAAAAGCAGGACTTAAGGTTAGAGGTGATTTAAGGTTTCACAGAACAAGAGAGTTTAAATATGCTCCTCGTATGGTAGTGCTCAAAGTGTTTTCCACCACCAGAAAGCCGATACGCTTGTGCTTGTTAAGACCTTATTGTAGTTTAGGGGGGAAACACAACGAAAGGATGGATTATTCTTCACCCACTACTACACAAATACCACGACAACAGATATTCAAATTCGTTGCTGATCGAATGCTTGTTGTTCTGAAAGATTGGAATTGGAGTAATTTACGCATCATGGCAGTAGCTGGCATATTGGTATCAGTTTTAATGATCACTCCATCAGCTGATGCTGTTGATGCTCTTAAAACTTGTTCTTGCTTATTGAAGGATTGCAGGTTGGAACTGGCTAAGTGTCTTTCAAACCCATCTTGTGCTGCCAATATTGCCTGTCTCCAAACTTGCAACAATCGACCTGATGAGACTGAATGCCAAATTAAATGTGGGGATCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAGTGTGCAGTCTCACGGAAGAAATGTGTGCCTAAGAAATCTGATTTGGGAGAATTTCCTGCTCCAAATCCTGATTTCCTTGTTAATAGCTTCAACATTGCGGATTTCAGTGGCAAATGGTTCATCACTAGTGGCTTAAATCCTACCTTTGATGCCTTTGACTGCCAATTACATGAGTTTCACACAGAATCCAATAAGCTTGTGGGTAATTTGACATGGAGAATACGGACTCCAGATGCTGGATTTATTACTAGGTCCGCTGAGCAGAAATTTGTTCAAGATCCTTCCTATCCTGGGATCCTCTACAATCATGACAACGAGTATCTTCACTATCAAGATGACTGGTATATTTTGTCATCAAAGATTGAGAATAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTGTATACAAGAAGTGCAGTGTTGCCAGAATCTATAGTTCCTGAACTTGAAAAAGCAGCCAAGAATGTGGGAAGAGACTTTAGCAAGTTCATCAAGACAGATAACACATGTGGACCAGAGCCTTCCCTGGTGGAAAGGTTGGAGAAAAAGGTAGAGGAAGGAGAGGAGACCATCGTGAGGGAAGTTGAACAGTTAGAAGAAGAGGTGGAGAAGGTGGGGAAAACGGAGGTTTCACTGTTTCAGAAGTTGGTGGAAGGGTTCAAAGTATTTCAAGAAGATGAGGAAAACTTCTTGAAAGGGCTTTCAAAAGAAGAAATGGAGATACTTAATGGCCTCAAAATGGAAGCCAGTGAAGTAGAAAAGCTCTTTGGAAATGCCTTGCCCATAAGGAAACTAAGATAA 1443 0.4165 MAAWGAHSILLSHGEGTGTPNVSVKAGLKVRGDLRFHRTREFKYAPRMVVLKVFSTTRKPIRLCLLRPYCSLGGKHNERMDYSSPTTTQIPRQQIFKFVADRMLVVLKDWNWSNLRIMAVAGILVSVLMITPSADAVDALKTCSCLLKDCRLELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDLGEFPAPNPDFLVNSFNIADFSGKWFITSGLNPTFDAFDCQLHEFHTESNKLVGNLTWRIRTPDAGFITRSAEQKFVQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELEKAAKNVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVEKVGKTEVSLFQKLVEGFKVFQEDEENFLKGLSKEEMEILNGLKMEASEVEKLFGNALPIRKLR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01285 480 CDD lipocalin_VDE 214 388 - -
Phco11g01285 480 Coils Coil 391 422 - -
Phco11g01285 480 Gene3D - 213 394 IPR012674 -
Phco11g01285 480 SUPERFAMILY Lipocalins 219 388 IPR012674 -
Phco11g01285 480 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 93 469 IPR044682 GO:0010028|GO:0046422
Phco11g01285 480 ProSitePatterns Lipocalin signature. 231 242 IPR022272 -
Phco11g01285 480 Pfam VDE lipocalin domain 142 382 IPR010788 GO:0046422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01285 11 9603677 9606616 Phco11g01285 11 9603677 9606616 ECH