Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01267 ATGCCGAAGAACAAGGGAAAGGGAGGTAAGAACAGGAAGAGAGGAAAGAACGAAGCCGACGACGAGAAGAGGGAGCTGGTGTTCAAGGAGGACGGACAGGAGTACGCGCAGGTCCTCCGCATGCTCGGCAACGGTCGCTGCGAGGCCATGTGCATCGATGGCACCAAGCGCCTCTGCCATATCCGCGGCAAGATGCACAAGAAGGTCTGGATCGCTGCCGGTGACATCATCCTCGTTGGCCTCCGGGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGCCTGACGAGGCCAGACTCCTTAAGGCCTACGGCGAGCTCCCCGACACCACACGCCTCAACGAGGGCATTGGCGCGGGCTTGGACGAGGAGGACGAAGCCACCGCCAACGACTACATCGAGTTCGAGGATGAGGACATCGATAAAATCTAA 438 0.589 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDTTRLNEGIGAGLDEEDEATANDYIEFEDEDIDKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01267 145 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Phco11g01267 145 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Phco11g01267 145 SUPERFAMILY Nucleic acid-binding proteins 2 144 IPR012340 -
Phco11g01267 145 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Phco11g01267 145 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Phco11g01267 145 Gene3D - 2 145 IPR012340 -
Phco11g01267 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Phco11g01267 145 NCBIfam translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Phco11g01267 145 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Phco11g01267 145 MobiDBLite consensus disorder prediction 1 25 - -
Phco11g01267 145 FunFam Eukaryotic translation initiation factor 1A 2 145 - -
Phco11g01267 145 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01267 Phco-Chr11 9531829 9532266 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01267 11 9531829 9532266 Phco1g00652 1 5923395 5923832 PCT