Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01184 ATGGCCGACAAGTACAACCTCAAGAACCCCGCCGTCAAGCGGATCCTCCAGGAGGTCAAGGAGATGCACTCCAACCCCTCCGACGATTTCATGAGCCTCCCTCTCGAGGAAAATATATTTGAGTGGCAATTTGCGATTAAAGGGCCTCGTGATACTGAATTTGAGGGTGGTATTTATCATGGACGGATCCAGCTTCCTTCAGAGTATCCATTCAAACCCCCTTCGTTTATGTTGTTGACACCTAATGGTCGTTTCGAGACTCAAACCAAGATTTGCTTGAGCATTTCAAATCATCACCCTGAGCATTGGCAACCATCATGGAGCGTGAGGACTGCTCTAGTTGCACTGATTGCTTTCATGCCAACGAACCCAAATGGTGCATTGGGATCTTTAGACTACAAGAAAGAAGAGAGGCGAACCCTGGCTGTAAAATCTCGTGAAGCTCCTCCTAAATTTGGGACTCCTGAACGTCAAAAGCTGATCGATGAGATACACGAGTACATGCTAAGCAAGGCACCCCCAGTTCCTCAACCAAGCGCCACAGAGGCTTCCGAAGAGCACCCCGGAAATGAGGAGGCTGAGGCCCTGGTTGATTCACCTAATCCTGAGTCTTTACCAGCTGGAGAGAGGATTCCAGATCAAGAAGGGGATGGAATTGTTGAAGAACAAGACGTCCTTGCAAATGCTAACCCTGCAGGAGTTGAAGTTTCAGGGGAGATTCAATCAAATGTTTCAAGGAATGAGCTGCCCCAAAAGTTAGATACAACTGCAAGGGTTCACAATACCAAGCCAGAGACAAGGGTCCAGAAACCTGATGATAGGCTGTTCACATTGGCAGCTATCGGACTCGCTATTGCTATTGTAGTACTTTTGCTCAAAAAGTTCATTAAGTCTACCGAACATGGGGCACTTTTCTCCAATGGATCTTGA 930 0.4731 MADKYNLKNPAVKRILQEVKEMHSNPSDDFMSLPLEENIFEWQFAIKGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAVKSREAPPKFGTPERQKLIDEIHEYMLSKAPPVPQPSATEASEEHPGNEEAEALVDSPNPESLPAGERIPDQEGDGIVEEQDVLANANPAGVEVSGEIQSNVSRNELPQKLDTTARVHNTKPETRVQKPDDRLFTLAAIGLAIAIVVLLLKKFIKSTEHGALFSNGS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01184 309 FunFam ubiquitin-conjugating enzyme E2 32 1 174 - -
Phco11g01184 309 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 130 - -
Phco11g01184 309 Gene3D Ubiquitin Conjugating Enzyme 2 173 IPR016135 -
Phco11g01184 309 MobiDBLite consensus disorder prediction 171 214 - -
Phco11g01184 309 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Phco11g01184 309 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Phco11g01184 309 SUPERFAMILY UBC-like 11 133 IPR016135 -
Phco11g01184 309 CDD UBCc 12 127 IPR000608 -
Phco11g01184 309 SMART ubc_7 13 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01184 Phco-Chr11 8872171 8874556 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01184 11 8872171 8874556 Phco11g01184 11 8872171 8874556 ECH