Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01176 ATGAAAACAGGGTGTGGGATTATGGCTCTCAGATATTTCTGCACTACAAATATTTCAACAAGACATCATGATTCTTCTGCTAAAATTCTTGTTCCATCTTCTCTCTCTTTAACAAACTCACGCATGCACAGTTCCACCCCAGAGACAAACACCAAGACCAAGTCTACTGCTGACAACTTGAAGAGCCTTGTCAACGCCCTCGTGCTTCCTTCCATTTCATCTTCTCCACTTCACTCTCTCCACAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTCAGCCTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCTGATGCATCAGTTGTTAGTGCTGTGAATGAAGGAATTGAAGCTGCAAGAGATATCGTATGCCTTAGAAAGCCGTGGGTGATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGGAAGGCCGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCAAGTGCAATATCATTCCTTGGGAAATCTTCGGGAATTTCCTATAATACTGAAGCACCAAGTGTACTCAAGGATGGAGTCATAACAGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATAAGAGAGGTAACATATGTAAGAGATGCTATTGCAACTGCTGAACTCATCAAGAGAAATGACGTTGATGCTATGGAGATACATACAAGTGGGAGACAGAGTACATTGTTCGAACAACTCTGGAGTGCTCTGGGAGATTCAGTAGGAAACTTGAAGCTTATAGCTGTTAGCTTACCTAATGTTGGTGATTCAACAATATCCTCCATGAACTATATGTTCTCTATTATGAAACCCAATCTTCAAAGCTTCAACTTATGGCAGTTAGATGGTCGTCCTATGAGTGGAGATATTGGGAGAGGAGCAACTAAGGAATCAATTGCCTTTGCTGTTCAACTGGCGAAAGCAAAAGAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACCAATGCTCACACAATTGAAGGGTTGAAAAAAGAGGGACTCTTTCAAACAACTATTAGTGAATACCTGCATGATGATAAATCAGCAATAAACTCATCTGATTCACCACATGCTTTAATTAGCGGCATAGCATATGGTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGAGATCAATGCAAACACAACATGGTGGAGCTGCTTCAATTGAGGATCATTCTGAGTATCTCTTGATGGCTCTTAAGGAAGCACTTGCTTTGGTGGGGCCTATTAAATGTATATGA 1347 0.4239 MKTGCGIMALRYFCTTNISTRHHDSSAKILVPSSLSLTNSRMHSSTPETNTKTKSTADNLKSLVNALVLPSISSSPLHSLHRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDIVCLRKPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPASAISFLGKSSGISYNTEAPSVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAIATAELIKRNDVDAMEIHTSGRQSTLFEQLWSALGDSVGNLKLIAVSLPNVGDSTISSMNYMFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKERPPGFLQLAGGTNAHTIEGLKKEGLFQTTISEYLHDDKSAINSSDSPHALISGIAYGGYARKIVGRVLRSMQTQHGGAASIEDHSEYLLMALKEALALVGPIKCI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01176 448 SUPERFAMILY 4Fe-4S ferredoxins 138 230 - -
Phco11g01176 448 Gene3D - 164 246 - -
Phco11g01176 448 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 IPR017900 -
Phco11g01176 448 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 158 189 IPR017896 -
Phco11g01176 448 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 80 241 - -
Phco11g01176 448 Pfam Iron-Sulfur binding protein C terminal 242 443 IPR021039 -
Phco11g01176 448 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 203 232 IPR017896 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01176 11 8804642 8808181 Phco11g01176 11 8804642 8808181 ECH