Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01172 ATGGAGGGTGGAGAGGAAGGAGTGGAGATGTTGGTGGACTCGAAGGACTTACAGCAACAGAGCAAAGCCTTGGATAAGCTCACTGACCGCGTCGAGGATCGCCAATTGGATTCCACTCGCGTCCAGGAGGCCATGGCTTCCATCGCTGCTTCTGCCGAAGCTGATCGCAATGCCATGCGCATCAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATGATTGCAAATGAGCTAGAGTTGGACAAAAAGGTTGCTGAAAGAACTTTGCGCGAGCACAAAGGTGACGCAGTTGCTGCAATTCGGCACTTGCTTCGCTAG 333 0.5075 MEGGEEGVEMLVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDMIANELELDKKVAERTLREHKGDAVAAIRHLLR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01172 110 Coils Coil 80 100 - -
Phco11g01172 110 CDD UBA_HYPK 69 109 IPR038922 -
Phco11g01172 110 Coils Coil 17 37 - -
Phco11g01172 110 Gene3D - 70 108 - -
Phco11g01172 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Phco11g01172 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01172 Phco-Chr11 8753408 8756599 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01172 11 8753408 8756599 Phco11g01172 11 8753408 8756599 ECH
Phco8g02144 8 22999438 23000137 Phco11g01172 11 8753408 8756599 PCT