Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01166 ATGCTCCAGGCATTGATGAGTCTTATCGCGCGCTGTTGGAAGCCGTTCGGGCTCGGTGACGACGCCAATGCCGGAAGAGAATGCAAGGACGGCCTCCTCTGGTTCCGCGATATCGGAAGGTTTGCCGCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAACCAGGTCCTCGAGGACCAGAGCCAGATCGAGTCCGGGCCCTTCGGCACCTTCGTCGGTGTCTACGACGGCCACGGCGGCCCTGATTGTTCGCGATATGTTTGCGATAACTTGTTCCGTAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAGCAGGCGTTTCGGCGGACTGAGGAGGGGTTCACAGCGCTTGTTTCGGAGTTGTGGAGCTCCCGGCCGCAAATTGCGACCACTGGAACGTGTTGTTTGGTTGGAGTTATTTGTCGGCAGACGCTGTTTGTGGCAAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTTGGCAACACTGGTGGGATGGCTGCGATTCAGCTGTCCACGGAGCACAATGCGAATATTGAGTCTGTTAGGCAGGAGCTTAAGGAATTGCACCCGGATGACCCCCAGATTGTTGTCCTCAGACATGGAGTGTGGAGAGTCAAGGGCATAATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGGGAACCCATTAATGCGAAATTCAGACTCCCCGAACCAATGAACATGCCTTTCTTGTCTGCTAATCCAACTGTTATTTCTCATCCAATCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCACGTGTGGGTAGTGCGAAGAAACTTATCAAGGCTGCCCTACAAGAAGCGGCAAGAAAACGTGAAATGCGATATTCAGACCTTTATAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGTTCTAAATTCGCCACTCACAGTTCGATGTGCGCTCGATCACTGA 1110 0.5054 MLQALMSLIARCWKPFGLGDDANAGRECKDGLLWFRDIGRFAAGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANIESVRQELKELHPDDPQIVVLRHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMNMPFLSANPTVISHPIQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPRVGSAKKLIKAALQEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLISRGAVLNSPLTVRCALDH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01166 369 Gene3D - 39 354 IPR036457 -
Phco11g01166 369 SMART PP2C_4 39 344 IPR001932 -
Phco11g01166 369 SUPERFAMILY PP2C-like 54 347 IPR036457 -
Phco11g01166 369 ProSiteProfiles PPM-type phosphatase domain profile. 45 346 IPR001932 -
Phco11g01166 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Phco11g01166 369 PANTHER PROTEIN PHOSPHATASE 43 344 IPR015655 GO:0004722|GO:0006470
Phco11g01166 369 Pfam Protein phosphatase 2C 70 315 IPR001932 -
Phco11g01166 369 CDD PP2Cc 46 346 IPR001932 -
Phco11g01166 369 FunFam Probable protein phosphatase 2C 42 36 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01166 Phco-Chr11 8727042 8734287 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01166 11 8727042 8734287 Phco11g01166 11 8727042 8734287 ECH
Phco8g02130 8 22827290 22831398 Phco11g01166 11 8727042 8734287 PCT