Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01163 ATGTTCTCCTCTCTCATGGCCAACCCAACCGATCGCTCACGTGACTCCCACCGCGTAAAGAAGAAGAAGAAATCCCCCGCCAAGCCACATCCCCACCAAGACCACTCCCAAACCAGATGGAAAACCCACGCGCAGCAGCACCTATATTCCTCCAAGCTCCACCAGGCCCTCGCGCGTGTCAACATCTCCGCCGACGCGCCCCGCCGTGGCAGGGCAGTCCGCGAGGCCGCCGACAGAGTCCTCGCCGCCGCCGCCCGCGGGAGGACGCGCTGGAGCCGCGCCATCCTCACCAACCGCCTCAAGCTCAAGTTCAGGAAGACACCGCACAAGCGACACAAGGTGGTTGGCCCGCCCCGCCCCAAGAAGCCCCGCTTCAGCGTCCTCCGCCTCAAGGGAAAAACCCTTCCCGCGGTTCAGCGCAAAGTTAGAGTCCTCGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGATCATTCTCGAAGAAGCCATCGATTACATACCTGCGCTCGAGATGCAGGTTCGCGCCATGGCGGATCTCGCTCACTTACTCCTCGGCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCATCCACCTCCGCGCCGCCGAGTTGA 615 0.6358 MFSSLMANPTDRSRDSHRVKKKKKSPAKPHPHQDHSQTRWKTHAQQHLYSSKLHQALARVNISADAPRRGRAVREAADRVLAAAARGRTRWSRAILTNRLKLKFRKTPHKRHKVVGPPRPKKPRFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLAHLLLGSSSSSSAAAASTSAPPS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01163 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 187 IPR036638 GO:0046983
Phco11g01163 204 MobiDBLite consensus disorder prediction 1 47 - -
Phco11g01163 204 CDD bHLH_AtIBH1_like 127 178 IPR044549 GO:0006355
Phco11g01163 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 189 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01163 Phco-Chr11 8702192 8702806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01163 11 8702192 8702806 Phco11g01163 11 8702192 8702806 ECH
Phco8g02121 8 22692667 22693278 Phco11g01163 11 8702192 8702806 PCT