Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01150 ATGTGGTGGTGGTACACGTCAAGTTTCCGGTGGCCGGAGCTAAACCTGTCGCTTCCGTGGTCGATTTTCCGGTGGCCGGCGTTGGACTTGTCGTATTGGAGTGTAGAAAGTGTGATTCAATGGAACTTGTCGTTGGTTGATGACGTGGTATGGGCCTTGATTACGGGCCTTGAGTCCATAGCTTTGGTCGCCTTGCTCTGCTACTTCTTCCTCTGTTGTGGTTTGAAGACTGAGAGTGCACAGCAAAAGAAAAGCAAGAAGACAGATAGAAGAAGCAATTTCGGAAAGAGGTTTTTGTCATCTTGCATGGAATTTCAATCTCCAACTTCTCGCCCTACCCGGAATGATGTCATTTTGAACCACCATCCACCATTTCCGATCATTCACCGGTTTCTGTTGCCGCCGCCGCCGCTGCCATCACCCTCGACGGTGCTGCTTCCGATACCTTTCAACCCCTCACTTTTCTTTACGATGGATAATCAAAGGTCCATCTCTCTGCTTCAGTTCATGGTTGATGAAGGACTTCTTCCGTCGGCAGCAGAGGAAGATAAACGACAAAATGTTATTCGGAAGCTTAAACAGGTAGTCTCATCGTGGATAAAGAAGGTTGCATGCCTACATCAACTACCAGAGCACCAAATTGCTGTCACATCTGCCACCATATTAAGTTATGGATCTTATGGCCTCGGAGTTCACAGCTCAGGGTCTGATATTGATGCTTTGTGTGTTGCTCCTTTCTTTGCCTCAATTGCAGAAGACTTTTTTGTTGTGTTGCACGACATGCTTAAAAGAAGACCTGAAGTATCATATATTCACTGTGTCAAGAGTGCAAAAGTCCCTTTAATGCGATTTAAATTTGAAGGGGTTTCCATTGATCTTCCATATGCTCGGCTTAATGTACTATATGTTCCTGAGAACGTTGACATATTAAATCCATTTTTCATGAGGAATATTGATGATACCAGCTGGAAAAGTTTGTCCGGGGTACGAGCAAATAAATATATTCTCCATCTAGTTCCTAATATAGAGAAATTTCAATGCATGCTACGATGTCTTAAACTATGGGCAAAAAGGCGAGGAGTTTATGGAACTCTACTTGGTTATTTGGGAGGAGTTCATATGACAGTTCTTGCAGCATATGTTTTGCTAAGACACCCTGATGCCACCTTAAATGCTATAATTATGAACTTTTTTCAAACATTTGCATTTTGGCCCTGGCCTACTCCAGTAATGTTGCAGGAAGGAATGTTAACAGTTATAGATGCGATAGAAACACGGTCCTTCATGCCTATATTTCTGCCATCTAGCCGTTATGAGTATTGTCATACAAATATTACTAAAAGCACTTTCTTTCGGATTAGGAGTGAGTTTCTTCGTGGATATGATATGACAAAGGATATTTTGAAGCCAGATTTCCTTTGGGATAATGTATTCGAGCCTTTTCCATACTCAAAAAGATACTCCCAATTTGTCAAAATTTATCTCTCTTCTCCTGACCATTATGCACTGGCAGAATGGGTTGGTTGGGTAAAGTCACGATTTCGAGGTCTTCTTGTGCATCTGGAGGTTACTCAAGGATTTTGTGACCCTAACCCTACAGAATATGTTGATAGTGAGAAAACAGAGCCAAATGTAGTTTTCTACTGGGGTTTGCAACCTAATAAGAAAAATTTCCTGGACATTGATTCGGTAAAGGGGGAGTTCATGAAGATTATAAAGAATGGGTATGAAGGTTCTCCTGGGAAGATGGAGATGTCTATCCTGTTCGCTTCTCAGCTGCCTAATTGA 1788 0.4217 MWWWYTSSFRWPELNLSLPWSIFRWPALDLSYWSVESVIQWNLSLVDDVVWALITGLESIALVALLCYFFLCCGLKTESAQQKKSKKTDRRSNFGKRFLSSCMEFQSPTSRPTRNDVILNHHPPFPIIHRFLLPPPPLPSPSTVLLPIPFNPSLFFTMDNQRSISLLQFMVDEGLLPSAAEEDKRQNVIRKLKQVVSSWIKKVACLHQLPEHQIAVTSATILSYGSYGLGVHSSGSDIDALCVAPFFASIAEDFFVVLHDMLKRRPEVSYIHCVKSAKVPLMRFKFEGVSIDLPYARLNVLYVPENVDILNPFFMRNIDDTSWKSLSGVRANKYILHLVPNIEKFQCMLRCLKLWAKRRGVYGTLLGYLGGVHMTVLAAYVLLRHPDATLNAIIMNFFQTFAFWPWPTPVMLQEGMLTVIDAIETRSFMPIFLPSSRYEYCHTNITKSTFFRIRSEFLRGYDMTKDILKPDFLWDNVFEPFPYSKRYSQFVKIYLSSPDHYALAEWVGWVKSRFRGLLVHLEVTQGFCDPNPTEYVDSEKTEPNVVFYWGLQPNKKNFLDIDSVKGEFMKIIKNGYEGSPGKMEMSILFASQLPN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01150 595 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 481 593 IPR011068 GO:0003723|GO:0016779|GO:0031123
Phco11g01150 595 Gene3D Beta Polymerase, domain 2 177 333 IPR043519 -
Phco11g01150 595 FunFam Nuclear poly(A) polymerase 3 483 588 - -
Phco11g01150 595 SUPERFAMILY PAP/OAS1 substrate-binding domain 340 480 - -
Phco11g01150 595 FunFam Poly(A) polymerase alpha, putative 177 333 - -
Phco11g01150 595 Gene3D Poly(A) polymerase predicted RNA binding domain 483 589 - -
Phco11g01150 595 Pfam Poly(A) polymerase central domain 158 480 IPR007012 GO:0043631|GO:1990817
Phco11g01150 595 CDD NT_PAP_TUTase 184 299 - -
Phco11g01150 595 SUPERFAMILY Nucleotidyltransferase 149 336 IPR043519 -
Phco11g01150 595 Gene3D - 158 478 - -
Phco11g01150 595 PANTHER POLY A POLYMERASE 156 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01150 Phco-Chr11 8604164 8619846 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01150 11 8604164 8619846 Phco11g01150 11 8604164 8619846 ECH