Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01146 ATGTGTGTAATTCACCTCTCTCTCTCCATGGACGCAAATTCACTGCTCCAGGGTTCTTCTCTTGCACCTTCTTATCCCCTCCCCAAGCTTTCAAAAACCACCATGACGACAACCAACTGCGTTAGATTCAATTTCAACCACAACCCATGCGTTATATTCGCAAATGGGTACCCTACTTCTTCTTCTTTGCTTCCATTTTCTATTCACAATAAGCCCAGTAAATCAGCTTCACTGATTGTGAGTGCCCGCAAGAAAGACAAGAAATATGATACCCATAGCTCCGTACCCCAACCTGACGAGTCCACGGGTTTCTTCCCCGAAGCTATCTTACTTAAAAAGAGATCAGTTGAGGAAGAAGGGAAGCTGCTCCCGGAGTTTGAAGATGCCGAGGAAAGAGAACTCTTTGAAACGCTAATGCTTGAGCTGGAAAGTGATATGAATGCTGAAATATTGCGCCACTATGAGATCATGTACTTAATTCATGAGAAGCATGAAGATGAGGTCGCAGCTGTCAACCAGAAAATTCAAGACTTTATGAGGGAGAAGAAAGGGCAGGTTTGGAGGGTGAATGATTGGGGTATGAGAAGGTTAGCTTACAAAATAAAGAAAGCTAATAAAGCCCACTACATGTTGATGAACTTCGAGTTGGATGCTAAATATATCAACAACTTGAAGACTTTGTTGGACCAAGATGAAAGAGTTATTCGGCATCTTGTGATAAAGAGGGACGAGGCAATCACTGAAGATTGCCCTCCTCCTCCGGAGTTTCATACTCTGCGTGCAAATGCAGACGATATCGAGGATGAAGAATTTGATGAAGAGTATGACGATGACTGGGATGGTGAAGATGAGGTTGATGGTGATGATGATGGTATTATATATGTAGATGGTGATGAAGATGAAGACATGGATTCAAGAAATGAGACATCTGCAAATGTTAGACTAGCAGAAGAAACAAGAGAGTTGAGGGCTGAGAACGTAGGTAGGTAA 990 0.4263 MCVIHLSLSMDANSLLQGSSLAPSYPLPKLSKTTMTTTNCVRFNFNHNPCVIFANGYPTSSSLLPFSIHNKPSKSASLIVSARKKDKKYDTHSSVPQPDESTGFFPEAILLKKRSVEEEGKLLPEFEDAEERELFETLMLELESDMNAEILRHYEIMYLIHEKHEDEVAAVNQKIQDFMREKKGQVWRVNDWGMRRLAYKIKKANKAHYMLMNFELDAKYINNLKTLLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRANADDIEDEEFDEEYDDDWDGEDEVDGDDDGIIYVDGDEDEDMDSRNETSANVRLAEETRELRAENVGR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01146 329 Gene3D - 146 249 IPR014717 -
Phco11g01146 329 MobiDBLite consensus disorder prediction 265 305 - -
Phco11g01146 329 MobiDBLite consensus disorder prediction 263 329 - -
Phco11g01146 329 ProSitePatterns Ribosomal protein S6 signature. 193 202 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 MobiDBLite consensus disorder prediction 306 329 - -
Phco11g01146 329 Pfam Ribosomal protein S6 153 241 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 CDD bS6 153 242 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 FunFam 30S ribosomal protein S6 151 245 - -
Phco11g01146 329 Hamap 30S ribosomal protein S6 [rpsF]. 151 244 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 147 262 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 NCBIfam 30S ribosomal protein S6 152 243 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 SUPERFAMILY Ribosomal protein S6 151 251 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Phco11g01146 329 Coils Coil 161 181 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01146 11 8574343 8577206 Phco11g01146 11 8574343 8577206 ECH