Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01145 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGGTTGAATCATAAAAAGGGGGTTTCTGGTGGTGTGCTTCCGGGAATGAAAAGCCATGGTAAAGAAGGGCCGGTGAAGGTTTTCCCGAGAGAGGAACTCGCTGACGGTGATAGCGGTGTTGCGCGGACTGCATGTGATGCTAGTTCTTCAGGTGATGACTTTAACAATGAGCAAAAATCTGAAAATATTTCTCGGAAAGAGAAGCAAGGGATGGCTGGAAAGCATGACCTGGAGGGGTCCTTGCCCTTTGAGAGAGATTCGGGGGATGGCAGTTTGAATTCCGAAGCTTCAGTACAAGAAGAAAATGGGACTTTACCTAGAAGTAATCAATGTCTTCAGAGTATAAATAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAATAGTGTGGTGGATAAAATAGACATTGCCGATAATGTGATAGTTAGGAGATTAAGGTTTTCACTGTTTTCCATGTTTACAGCAATTTCAGAGTGGCTAACCAGGCAGACTCCATTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATAATTTCAGAACGAAAGTTGTGCAGGCATATCCTGTTATTCTGAAGTGGCTCAAGCATTTTGGAAATGTAATGCTCCTATTATCAGTATTTTGGTTGGACTGTGCACTTCGGGGTATTGATTCTTTTGTACGGATGGGTACAACGCCGTTCTTCTCTGTTATATGGTGTAGCATATTTTCCGTGATTAGTATGATAGGGGTGCTCAAGTTTCTTGCTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTCTTGGTCTCATGCTTGCAATTTTGGTAGTTGCAATCATTGGAGTTGTTATCTTGTGGTTTTATGGTAGCTTTTGGACAACGGGATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTCAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGCTGTATGTTGGGTGGCTTGGTTTGCTATTGGCTTTCAATTTAGCCTTTATATCTAGTGATGTCCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGTCAACCAGGATTTAGTGATGGATCAACACATGCTTCTTCCTCTGAAAATGGACCGGGACCATCTGCAGATCGCAGTGCTGGCATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGAGGAAGTCGTCCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGATGCGGTATCAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCGTTGAAGCGAAAAGCTTACGATGATGAACTAAGGAGAGAGGAGCTTTTGAGTGTATTTCGTAGATTTCATGATGCTCCTCATATGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGCCTGATGCAGATGGCAAGGATCCATTTGGTGAATCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGTTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGGGATGGATGGGTGGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCATATGTGTGTGCTGGTAGCAGGATATACGATGCCACCGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAATACTCATAAGCCAAGTTTCCATGTTAACACCAGTTTAATGTCTAAGAGTAATTCTGGCAAAGGAACTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAACATCAAATATCGAAGAAACCATGACTGAGGAAGAATTCTTTGAATGGTTACAGAATGCAGTACAGGCAGGTGTCTTCGACAATTTTAGTGGCACTGCACCAGAGAGCCCATCTCCCAAATCTGGAAATGGGATGAAAAGTCCTGGCAGTAGTAGTGGTGGTGGTGCTAGTGCGAGTGGCAGCAGCAAGAGAAAGAAAAAGGGGAAAAAGCAATGGTGA 2217 0.4326 MARKGNQQKNGVDRHGLNHKKGVSGGVLPGMKSHGKEGPVKVFPREELADGDSGVARTACDASSSGDDFNNEQKSENISRKEKQGMAGKHDLEGSLPFERDSGDGSLNSEASVQEENGTLPRSNQCLQSINSRLSCILDSLHLNSVVDKIDIADNVIVRRLRFSLFSMFTAISEWLTRQTPLFVSLRTIMFKAYHNFRTKVVQAYPVILKWLKHFGNVMLLLSVFWLDCALRGIDSFVRMGTTPFFSVIWCSIFSVISMIGVLKFLAVLGLAALIGFFLGLMLAILVVAIIGVVILWFYGSFWTTGFFIILGGLAFMFSHERVALLITTVYSVYCAWLYVGWLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMHGQPGFSDGSTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEEEVVRLLNCSDHYAALGLMRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDAPHMNGRHGFFPSGFARPDADGKDPFGESRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKSNSGKGTSSGQRGGRMPTSNIEETMTEEEFFEWLQNAVQAGVFDNFSGTAPESPSPKSGNGMKSPGSSSGGGASASGSSKRKKKGKKQW 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01145 738 CDD DnaJ 436 492 IPR001623 -
Phco11g01145 738 Pfam DnaJ domain 436 500 IPR001623 -
Phco11g01145 738 SUPERFAMILY Chaperone J-domain 431 526 IPR036869 -
Phco11g01145 738 PANTHER OS03G0832900 PROTEIN 1 738 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 389 421 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 642 667 - -
Phco11g01145 738 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Phco11g01145 738 SMART dnaj_3 435 495 IPR001623 -
Phco11g01145 738 MobiDBLite consensus disorder prediction 58 72 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 38 52 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 693 738 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 1 122 - -
Phco11g01145 738 PRINTS DnaJ domain signature 475 495 IPR001623 -
Phco11g01145 738 PRINTS DnaJ domain signature 458 473 IPR001623 -
Phco11g01145 738 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Phco11g01145 738 MobiDBLite consensus disorder prediction 73 98 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 693 725 - -
Phco11g01145 738 MobiDBLite consensus disorder prediction 105 122 - -
Phco11g01145 738 Pfam Cleavage inducing molecular chaperone 545 643 IPR032843 -
Phco11g01145 738 Gene3D DnaJ domain 423 513 IPR036869 -
Phco11g01145 738 MobiDBLite consensus disorder prediction 387 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01145 Phco-Chr11 8567496 8572842 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01145 11 8567496 8572842 Phco11g01145 11 8567496 8572842 ECH