Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01144 ATGGATATGCGAGGAGATGGGATTTTCCCGGATGAGGTGGTTATTCAAATTCTTGCAAGGTTGCCTGTGAAGTCGCTTTTCAGGTTCAAAACCGTGTGCAAACTGTGGAATAGGTTGTCTTTGGATAAGTATTTTGTTCAACTCTACCATGAGGTGTCTAGGAAGAACCCCATGATTCTGGTCGAGGTTTCTGATTCGTATGGGTCCAAATCTAGCTTAATATGTGTTGATAATTTGAGGGGTGTGTCTGAATTTTCACTGAGTTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGCCTGCTTTGCTGCTCTAGTATTCCTGATAAGGGCGTCTTCTATGTCTGTAATCCAGTCACTCGCGAGTACCGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGCGAGGCTACCTTGGTTGGCTTGGCCTGTGATTCTTCTTATCAGAAGTTCAATGTTGTTCTAGCAGGCTACCATCGCACTTTTGGTCATAGGCCGGATGGGAGTTTTATATGTTTGGTGTTTGATTCCGAGTTGAACAAGTGGAGGAAGTTTGTCTCATTACAAGATGACCATTTCACTCACATGAATAAGAACCAGGTTGTTTTTGTCAATAACGCTCTTCACTGGTTGACAGTTAGCTCTACTTATATACTCGTGCTTGATTTAAGTTGTGACGTTTGGAGGAAGATGCAGCTACCATATGACTTGATTTATGGAAATGGTTATAGGATTTATCTCTTAGACTTTGATGGCTGCTTGTCTGTTATAAAAATTTCAGAAGCATGGATGAATATATGGGTGCTAAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACTGGTGAATATGTTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATTGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTGAAATATAGCTCAACACTCCCATTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCATCCAGTGTCAATCCTGTGGAGCCATTTCTCAGACTTGTGCCTTCTGGATATGGCTTAGTTCATAGCCTTTGTTTATTCCAGCTACCAATGCATAGTCCCTGCTCTTACATTGTGCGTTACTTGACTTTACTTCCAGATTCTGCTTCCTCCCCGTCACAATCACTCCTGCCACCACTAACGCAGAACAGACAGACCCACAGATACAATACATACTTCGCCCTGTCAGGAGCAGAGCAGAAGACTTATTCTGGGGATGAGTTGAATTTATTGATAGCGCTTGGTGTGTTTGGTTGGTTACATGGTAACTCCGTTTGCACTAGAGTGGTTTGTGTTGAAAATGGGAGTGGTGAGTGGATGACACATTAG 1440 0.4264 MDMRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWNRLSLDKYFVQLYHEVSRKNPMILVEVSDSYGSKSSLICVDNLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDSSYQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFVSLQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDVWRKMQLPYDLIYGNGYRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHKQILVYHCKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSSSVNPVEPFLRLVPSGYGLVHSLCLFQLPMHSPCSYIVRYLTLLPDSASSPSQSLLPPLTQNRQTHRYNTYFALSGAEQKTYSGDELNLLIALGVFGWLHGNSVCTRVVCVENGSGEWMTH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01144 479 Pfam F-box-like 10 53 IPR001810 GO:0005515
Phco11g01144 479 CDD F-box_AtFBW1-like 9 45 - -
Phco11g01144 479 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Phco11g01144 479 PANTHER BNACNNG10540D PROTEIN 9 363 - -
Phco11g01144 479 NCBIfam F-box protein interaction domain 99 328 IPR017451 -
Phco11g01144 479 Gene3D - 9 45 - -
Phco11g01144 479 SUPERFAMILY F-box domain 9 78 IPR036047 GO:0005515
Phco11g01144 479 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01144 Phco-Chr11 8561225 8566921 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01144 11 8561225 8566921 Phco11g01144 11 8561225 8566921 ECH