Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00965 ATGTTCTCTTCACCTACGAAAACTCCACAACTCACTTTTCCACCATTTCCCACGTTCCTTGCGCCACCCCAGAGGCTCCTCTCAAAAGGGTGCAGACAATGGAGGCATTCCATGTGTGTGAATGCAAAACCCCTTCTCAAAGATGGCACTCTCAGTGTTGATGGCAAGGATGCATTAAGGGGTGTGCCTGAAAATGTGGTGGTCACTCCATTCACTGCTTCATCTGCTTTCATAGGGGCCTCTTGTGCTGATGCTAGTTCACGCCTTGTGTTCAAGCTTGGAGTTATACAGGATGTCAGATTATTGTGCCTATACAGATTAAAAATTTGGTGGATGATACCACGTGTGGGGAACTCGGGGAGGGACATTCCTATTGAAACTCAGATGTTGCTCTTGGAAGCAAGAGGGGGAATGGATTCACAATCATCCAAGGAACGGAATTCATACATCATTTTCCTGCCAGTTCTAGATGGTGATTTTAGAAGCAGTTTGCAAGGAAATTCACTTGATGAACTTGAGCTTTGTGTTGAAAGTGGAGACCCAGCAGTAGTTACATCCCAATCCCCAAATGCTGTTTTCATAAATTATGGAGACCATCCATTTGATCTAGTGAAGGAATCTATCAAGTTCTTATCAGAACACAGTGGTACCTTTTCACAGAGGGAAATCAAACAAATGCCAGGCATGTTAGATTGCTTTGGTTGGTGCACTTGGGATGCTTTTTATCACAGTGTTAATCCTCAGGGAATCAGGGATGGACTCAAGAGTTTATCTGAAGGAAGCACACCAGCAAAATTCTTGATAATAGATGATGGATGGCAAGACACTGTGAATGAGTTTCAAAAAGATGGGGAGCCATTTATTGAAGGATCACAATTTGGTGGCAGATTAATCAGCATCAAAGAAAATAATAAATTCCGAGCAGTAGGGAATGTAACTGAAAATGGGGCACCAGTTAGTCTAAGGGATTTTGTTTCAGAAATCAAGAGCAATTTTGGTCTCAAATATGTCTATGTATGGCATGCCCTACTGGGTTACTGGGGAGGTTTAGATCCAAATGCATCTGGAACTAAAAAGTATGATCCAAAACTTAGATACCCAGTACAGTCACCTGGGAATTTAGCAAATACACGGGATTTATCTATTGATGCCATGGAGAAGTATGGTATTGGTGTCATTGATCCAGCTAAAATTTCAGAGTTCTACGATGATCTACACAGTTATCTTGTCTCTCAAAACATTGATGGAGTTAAGGTTGATGTTCAAAACATACTGGAAACAATTTCAAGTGATCTAGGAGGACGGGTTTTTCTCACTAGACATTTTCAACAGGAGCTTGAAAAGTCCATATCAACCAATTTTCAGGACAATAGCATAATCTGCTGCATGGGTCATAACACTGACTCCATTTACCACTCAAAACAAAGTGCAATTACGCGAGCATCTGATGACTATTATCCTCAAAACCCCACAACTCAGTCTCTACATATAGCTGCTGTAGCTTTCAACAGCATATTCCTAGGTGAAATTGTTGTACCGGACTGGGACATGTTCTATAGTCTCCACGATGCAGCTGAGTTCCATGCAGCTGCTAGAGCGGTTGGAGGATGTGGAGTATATGTAAGTGACAAACCTGGCCAACATGATTTCAATGTATTGAAAAAGCTTGTACTTCCTGATGGATCAGTTCTCAGAGCCAGATATCCTGGGAGACCATCGCGTGATTGCTTATTTACTGATCCAGTTATGGATAAGAAGAGCCTTCTCAAGATTTGGAACTTGAACAAATGTGGGGGAGTCATAGGCATCTTCAATTGCCAAGGAGCAGGTTCCTGGCCTGGGGAAAGTAAGGCCGAGGAAGACATTATTTTTGAGCTATCTGGCAAGGTTTCTCCCTCAGATATTGAGTATTTTGAAGAGGTTTCAGGAGGGCCATGGACTCAAGATTGTGCAGTTTTTCGCTTCAATACAGGATCTCTGACACGACTATCAAAGGAAGAATCATTTGATGTCACATTAAAAGTATTGCAGTGTGAAGTATTCACAGTATTTCCTATAAAGGTTTATAACCAAGCAATCCAATTTGCACCAATAGGACTAACAAATATGTATAACTCTGGTGGAGCTGTTGAAGCAGTTGAATCCAGTGATTCTTCTGAGTCTAAAATACACATAAGGGGTAGAGGAGGAGGTGACTTTGGAGCTTACTCCAACTTAAGACCAAAGTCTTGCTGTGTAAATTCTGAAGATTTGCAGTTCAAATTTAGAGAGGAAGATAAACTTTTTGTAGTAACAATTCCACCTAAAACCCCTTCATGGGACATCACCATCTACTACTGA 2340 0.4145 MFSSPTKTPQLTFPPFPTFLAPPQRLLSKGCRQWRHSMCVNAKPLLKDGTLSVDGKDALRGVPENVVVTPFTASSAFIGASCADASSRLVFKLGVIQDVRLLCLYRLKIWWMIPRVGNSGRDIPIETQMLLLEARGGMDSQSSKERNSYIIFLPVLDGDFRSSLQGNSLDELELCVESGDPAVVTSQSPNAVFINYGDHPFDLVKESIKFLSEHSGTFSQREIKQMPGMLDCFGWCTWDAFYHSVNPQGIRDGLKSLSEGSTPAKFLIIDDGWQDTVNEFQKDGEPFIEGSQFGGRLISIKENNKFRAVGNVTENGAPVSLRDFVSEIKSNFGLKYVYVWHALLGYWGGLDPNASGTKKYDPKLRYPVQSPGNLANTRDLSIDAMEKYGIGVIDPAKISEFYDDLHSYLVSQNIDGVKVDVQNILETISSDLGGRVFLTRHFQQELEKSISTNFQDNSIICCMGHNTDSIYHSKQSAITRASDDYYPQNPTTQSLHIAAVAFNSIFLGEIVVPDWDMFYSLHDAAEFHAAARAVGGCGVYVSDKPGQHDFNVLKKLVLPDGSVLRARYPGRPSRDCLFTDPVMDKKSLLKIWNLNKCGGVIGIFNCQGAGSWPGESKAEEDIIFELSGKVSPSDIEYFEEVSGGPWTQDCAVFRFNTGSLTRLSKEESFDVTLKVLQCEVFTVFPIKVYNQAIQFAPIGLTNMYNSGGAVEAVESSDSSESKIHIRGRGGGDFGAYSNLRPKSCCVNSEDLQFKFREEDKLFVVTIPPKTPSWDITIYY 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00965 779 PANTHER - 46 769 IPR008811 -
Phco11g00965 779 FunFam Uncharacterized protein 230 558 - -
Phco11g00965 779 Gene3D Aldolase class I 228 555 IPR013785 -
Phco11g00965 779 Pfam Raffinose synthase or seed imbibition protein Sip1 47 763 IPR008811 -
Phco11g00965 779 SUPERFAMILY (Trans)glycosidases 229 557 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00965 Phco-Chr11 7100793 7105496 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00965 11 7100793 7105496 Phco11g00965 11 7100793 7105496 ECH