Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00956 ATGGTGCAGTGCTTTGATGGATTAAAGCAGTTGTATACTGCTGTGATAAACTTTTGTAATGCTGATTTGACCCAGCAGCAGCCTAGAGGCTTACAACATCCAGAAGCACTTGCTAGAGAAACCGTGTTTAGTGTAAGTGAGATTGAAGCACTGTATGAACTATTCAAGAAGATCAGCAGTGCAGTAACTGAAGATGGACTACTTACTAAGGATGAATTTCAGTTGGCCTTATTCAAGACAACCAAGAAAGAGAGCTTATTTGCGGATAGGGTGTTTGACTTGTTTGACACAAAGCACAATGGGATACTTGATTTCAAAGAGTTTGCACTTGCTCTCTCTGTCTTTCATCCCAATGCATCAATTAATGATAAAATTGAGTTTTCATTCCAACTGTATGATCTCAAACATCAAGGATTTATTCAGAGACAGGAGTTAAAACAAATGGTGGTGGCTACTCTAGCTGAAGCTGGCATGAATCTTGCAGATGACGTGATTGAAAGCATTATTGACAAGACATTTGAGGAAGCTGATACAAAACATGATGGGAAGATTGACAAGGAAGAATGGCGAAACCTTGTCTTGCGACATCCTTCCCTTCTTAGAAATATGACTCTTCAGTATCTTAAAGATATTACAACTACCTTTCCCAGTTTTGTATTTCACTCACAAGTTGATGATGTTTGA 684 0.386 MVQCFDGLKQLYTAVINFCNADLTQQQPRGLQHPEALARETVFSVSEIEALYELFKKISSAVTEDGLLTKDEFQLALFKTTKKESLFADRVFDLFDTKHNGILDFKEFALALSVFHPNASINDKIEFSFQLYDLKHQGFIQRQELKQMVVATLAEAGMNLADDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLRNMTLQYLKDITTTFPSFVFHSQVDDV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00956 227 ProSiteProfiles EF-hand calcium-binding domain profile. 164 199 IPR002048 GO:0005509
Phco11g00956 227 PRINTS Recoverin family signature 184 204 - -
Phco11g00956 227 PRINTS Recoverin family signature 91 112 - -
Phco11g00956 227 PRINTS Recoverin family signature 138 156 - -
Phco11g00956 227 Pfam EF-hand domain pair 123 191 IPR002048 GO:0005509
Phco11g00956 227 SUPERFAMILY EF-hand 35 219 IPR011992 -
Phco11g00956 227 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Phco11g00956 227 PANTHER CALCINEURIN B 19 226 IPR045198 GO:0005509|GO:0019722|GO:0019900
Phco11g00956 227 Pfam EF-hand domain pair 64 108 IPR002048 GO:0005509
Phco11g00956 227 FunFam calcineurin B-like protein 3 33 226 - -
Phco11g00956 227 Gene3D - 33 227 - -
Phco11g00956 227 SMART efh_1 168 196 IPR002048 GO:0005509
Phco11g00956 227 SMART efh_1 124 152 IPR002048 GO:0005509
Phco11g00956 227 SMART efh_1 87 115 IPR002048 GO:0005509
Phco11g00956 227 CDD EFh 124 193 IPR002048 GO:0005509
Phco11g00956 227 ProSiteProfiles EF-hand calcium-binding domain profile. 120 155 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00956 Phco-Chr11 7056209 7059111 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00956 11 7056209 7059111 Phco11g00956 11 7056209 7059111 ECH
Phco8g02407 8 26958581 26963038 Phco11g00956 11 7056209 7059111 PCT