Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00944 ATGCACACACAACCACTAACTTCTGACTCATTTAACTTCAAAACAGCAATACTGTTACAACCTGCGGCCACAAATTTGTTGTGTTCCTGGGAATACACTAAAAGGCTTCCTTCTAGCGACTGGTTAACCGGCGGAGAATCTTTGGATCCGCAGTGTGTGACTGTGATTGTGATTGGTATATGTGGAAGTATTTCTGCATTCTATTTCAAATCATTTCCCTCCATAGCACTCCGAACTCTTCATTCCAAACGGAAAGGGGTAGATACCTTTCGCCCGCATATAATGAGTTTCAGAATTAGAGATCAAGAAAAGGAATCTGATTCTCCAAGAGAAGTTGGAGAGATTGACACAAGGGCTCCATTTCAATCTGTTAAAGCAGCTGTTAGTTTATTTGGTGAAGTAGCCGTCTCAAGGGAAAAGCGTTCTTCTTCTATCAAGAGAAGATCATCAGAGAATGTGCTGGAAAAGGAGACTCAGCTTCTCTTGGCCCAAAGAGAATTACAGATGATAAAGAAAAAGCTGGATAGTTCTGAGAGCACAAAAGGAAAAGCACTTTCCGAGCTTGATAAGGCCAATGTGACACTTCAGGAATTGAAAAAGAAGCTCATCAGTGTGAGAGAATCAAAGCAATCAGCAATAGAAGCTGCTGAAGCTGTGAAGAATCAGGCCAAAGAACTTGAACAGGCATTATCCCAAAAAGCTATAGGATATGAAGCTTGGAAACAAGAACTAGAGCATGCAAGAAAAGAGTACACAACAACAGTAAAGGAACTAGATGCTACTAAGCAAGAACTCAATAAAATAAGGCAGGATTTTGACACAGCTTTGGAGGCAAAACTGGCTGCATTCCAGACAGCAGGAGAGGCTCAGCGTTCTGCAAAATTGAACTCAGAAAAGCTCCACGAACTCTCAAAGCAAATTGCAACCATGAAAGAACAAATTGAACATTTGAAGGCTGCCTCATCACAAGCCCAAGATAGTCAGGAAAAGGTCATGGAAGAAAGAGAAGCACGATTAAGTTTCTACAAAAATGCCAAGGAAGAAGCACAGAATAAATTGACGACTTTGAAGAATGAGTATGACCAGGAACTAACACAAAGTCTAGAGGCCAAACTTCATGAAACCAGTGAAGAGATTCAGGTTCTCCAAGAGCAGATGAAACAGGCCCATGCTTCAGAGATGGATTCTGTGAGACTTATAACTTTGGAGATCAAAGAAGCCACAAAAACACTTCAGGAAGTTGCTGAAGAGGAAACCTCCCTGAGAAACCTAGTGGATTCCCTCAGGACAGAGTTAGAACAAGTCAAGAAAGAGCAAGAGGAACTCAAGGAGAAGGAACAGGCAGCAGAAGCCCTTGCTGCTACCCTAACTGATAAACTACAGAATGGATCAGAAGAGACAAGTTCTGTGGTGGAAAAAGAATCTGAAGACAGTGCTGCAGTAGAATTGAAGATCAAACAGCTTTCATTTGAGACAGAAGCTGCAAGAAGGGAAGAAGAAGAAATGAGAAGCAAAACTCAAGAGCTGAAGCATGAGGCTGAAAAATCCAAAGCTATGGCAGAAGAATTACAGAAGAAACTAGAGCTTTTTCTGAAACAGGCTGAGGAAGCAAAAGCAGCAGAACAAAAAGCCATTGAGGAGATGAAGATGATGTCTGGCAGTGACAACACTCAAGACACAGTCTCAGTTTTAGATTCCAATGGGAAGATTGTGTTGACAGTTGATGAGTTTGCAGCATTGAGTGGGAAAATAAAGGAATCTGAAGATTTGATTGACAGAACAGAAACAGCATCATTGGTTCAGGTAGAAGCAATCAACTCAAGAAAGAATGAAGTGAACAAAAAGGTGGAGGCAAACCTGAAAGCAATTGAGGAAATAAAGGCTGCAACAGACATGGCTCTGAGGAATGCAGAGATGGCAGATTCTGCAAAGGTTGCAGTTGAGTGCGAACTAAAGAAGAGGCGTCTAGAAGAACAAAACTCGGAATGCTCAGACAATTCTCCAAGACCAATCTCTCTGCGTATTTAA 2028 0.4162 MHTQPLTSDSFNFKTAILLQPAATNLLCSWEYTKRLPSSDWLTGGESLDPQCVTVIVIGICGSISAFYFKSFPSIALRTLHSKRKGVDTFRPHIMSFRIRDQEKESDSPREVGEIDTRAPFQSVKAAVSLFGEVAVSREKRSSSIKRRSSENVLEKETQLLLAQRELQMIKKKLDSSESTKGKALSELDKANVTLQELKKKLISVRESKQSAIEAAEAVKNQAKELEQALSQKAIGYEAWKQELEHARKEYTTTVKELDATKQELNKIRQDFDTALEAKLAAFQTAGEAQRSAKLNSEKLHELSKQIATMKEQIEHLKAASSQAQDSQEKVMEEREARLSFYKNAKEEAQNKLTTLKNEYDQELTQSLEAKLHETSEEIQVLQEQMKQAHASEMDSVRLITLEIKEATKTLQEVAEEETSLRNLVDSLRTELEQVKKEQEELKEKEQAAEALAATLTDKLQNGSEETSSVVEKESEDSAAVELKIKQLSFETEAARREEEEMRSKTQELKHEAEKSKAMAEELQKKLELFLKQAEEAKAAEQKAIEEMKMMSGSDNTQDTVSVLDSNGKIVLTVDEFAALSGKIKESEDLIDRTETASLVQVEAINSRKNEVNKKVEANLKAIEEIKAATDMALRNAEMADSAKVAVECELKKRRLEEQNSECSDNSPRPISLRI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00944 675 Coils Coil 646 666 - -
Phco11g00944 675 Pfam Weak chloroplast movement under blue light 114 659 IPR008545 -
Phco11g00944 675 MobiDBLite consensus disorder prediction 656 675 - -
Phco11g00944 675 Coils Coil 237 278 - -
Phco11g00944 675 Coils Coil 397 462 - -
Phco11g00944 675 Coils Coil 300 392 - -
Phco11g00944 675 Coils Coil 488 551 - -
Phco11g00944 675 MobiDBLite consensus disorder prediction 494 517 - -
Phco11g00944 675 Coils Coil 181 233 - -
Phco11g00944 675 MobiDBLite consensus disorder prediction 456 476 - -
Phco11g00944 675 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 113 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00944 Phco-Chr11 6959274 6964499 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00944 11 6959274 6964499 Phco11g00944 11 6959274 6964499 ECH
Phco8g02421 8 27128626 27130556 Phco11g00944 11 6959274 6964499 PCT