Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00836 ATGGCATCGTCAGCAGCGCCGTCGCTAAACGCGGTGCTGGACCGCGTCCAAGGGGCTACTGAGCGCTCTGGCCGGAATGTGCAAGAGATCCGTGTTGTGGCGGCTAGCAAGACCAAGTCAGTTTCTGCTCTCCGTCAGGTATACGACGCCGGCCATAGATTCTTTGGCGAGAACTACGTTCAGGAACTCCTTCAAAAAGCTCCTCAGCTTCCCGGTGACATCGAGTGGCATTTCATTGGCAATTTGCAGAGTAACAAAGTCAAGCCTCTTATCGCTGGTGTTCCCAACCTTGCTTGTGTAGAAACTGTGGATGACGAGAAGATTGCAAATCTTCTTGATCGTGCTGTAGCAAATGTTGGCAGGAAACCCTTGAAGGTTTTTGTTCAAGTGAATACGAGCGGAGAAACCTCCAAATTTGGAGTTGAACCAGCTGTGTGTGTGGATCTTGTAAAGCACATCACAAACTGCTCAAACCTTGAGTTTTCTGGTCTAATGACAATTGGCATGCTAGATTATTCATCCACCCCAGAAAATTTTAAGATGTTGTCCAATTGCAGAACTGAAGTTTGTAAAGCACTTGGAATATCAGAAACGCAATGTGAGTTATCAATGGGCATGACTGGAGACTTTGAGCAAGCTATCGAGATGGGAAGTACTAATGTTAGGATTGGAACTGCCATATTTGGAGCCAGAGAATATCCAACGAAAGAAGAGAAGTAG 720 0.4639 MASSAAPSLNAVLDRVQGATERSGRNVQEIRVVAASKTKSVSALRQVYDAGHRFFGENYVQELLQKAPQLPGDIEWHFIGNLQSNKVKPLIAGVPNLACVETVDDEKIANLLDRAVANVGRKPLKVFVQVNTSGETSKFGVEPAVCVDLVKHITNCSNLEFSGLMTIGMLDYSSTPENFKMLSNCRTEVCKALGISETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYPTKEEK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00836 239 PIRSF YBL036c_PLPDEIII 2 237 IPR011078 GO:0030170
Phco11g00836 239 Pfam Alanine racemase, N-terminal domain 13 231 IPR001608 -
Phco11g00836 239 ProSitePatterns Uncharacterized protein family UPF0001 signature. 76 90 IPR011078 GO:0030170
Phco11g00836 239 FunFam Pyridoxal phosphate homeostasis protein 1 238 - -
Phco11g00836 239 SUPERFAMILY PLP-binding barrel 5 229 IPR029066 -
Phco11g00836 239 Hamap Pyridoxal phosphate homeostasis protein. 7 230 IPR011078 GO:0030170
Phco11g00836 239 Gene3D Alanine racemase 1 239 IPR029066 -
Phco11g00836 239 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 8 231 IPR011078 GO:0030170
Phco11g00836 239 CDD PLPDE_III_YBL036c_euk 9 229 - -
Phco11g00836 239 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 4 236 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00836 Phco-Chr11 6134634 6137171 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00836 11 6134634 6137171 Phco11g00836 11 6134634 6137171 ECH