Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00413 ATGGTATGGTACTGCCCCTTGCCTCTTCAAACTCACCGTTTTTTTCTTGTTACTCTTGGGTTGGATTGCTTATTTATTGGGGTTAATAGATCAGTTCAAACTGGGCAAATCTCCTTTGGCATTTTGGAGTCTTTGATAGACTCTTGTTACCCTATCAGACACAAATATCCTTTGAAGTCAGCATTGACATATCTGTTGTGGATCACAATAGCCCCTGTTCAATGTTTCTGTTTGCTTGAGAAGTTGATGGATGCTCACATTACTGATTTGGATTGGGAGACTTCCAGTGACAGCAGCAGCAGCAGTGAGGATCAAGAGGATATTGATTTTGAATATGGTGGACAAGCTCGAAGCATATTATCGAGTTTAGAGGAAAGCATTGGGAAGATTGATGATTTTCTCTCCTTTGAGAGGGCATTTGTCCATGGGGATGTGGTCTGTGCCTCCTCAGACCCATCCGGACAGATGGGGAGGGTCACAAGTGTTGATGTGTTAGTGGACTTGGAAAGTGTTCAAGGAAAGAAATTAAAAAATGTGAACTCCAAGAAACTTACGAAGATTCGCTCCATTTCAGAAGGCGATTACGTAGTTAAGGGGCCATGGATTGGTCAGGTTCAAAAGGTGGTAGACAGAGTGATTATATTGTTTGACGATGGAACTAAATGTGAGGTCATTACCTTGGAAAAAGATCAGCTTTTACCACTGACTCATAATCTTCTTGATGATTCACAGTATCCGTACTATCCAGGGCAAAGAGTCAAGGTTAAGACCTCCACAGCTTCTAAACCAGCTAGATGGCTATGTGGCACCTGGAAAGATAGTCATGGTGAAGGAACTGTTTGTGCTGTGGAAGCAGGTTTGGTGTATGTTAATTGGTTTGCCTCTGTTCTTTTCGGTTCCAATTTGAATGTAAATGTTCCTCTATGCTGGCAAGATTCAAAAAACATGACCTTGTTGTCCTGTTTTTCACATACAAACTGGCAACTTGGTGATTGGTGCATGCTTCCACCACCTGTGGACCAAAAGGAACAGATGATTCAAGATGCATCTCCATGTGATCCTCATAACGAGCATAATAAGGCTAGAGGATATAAGACGAAAAATCTTAACTCTAACATTGGGGAATTATTTATAATTGAGAAGATAAAGACCAAAGTTGATATTGTTTGGCAAAATGGTGAACATACTTTTGGATTAGATCCGCTTAACTTAATCCCAGTGAATGTCATAAACAGTCATGAATTTTGGCCCCAGCAGTTTGTGCTGGAAAAAGGTGCTTCTGATGATCCTCTCAAACCTAGCAATCAAAGATGGGGTGTTGTTCTTTCCATGGATGCAAAAGAGCATACTGTAAAGGTACAATGGAGAACTGCTCCCACATCCGAGACAGATAATTTGACTGGAGATGCAATGATGGAAACTGTGAGTGCCTACGAACTACTCGAGCATCCAGATTATTCTTGTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAAAAGCAGCTTGGTGACCATGCTGACAAAGATAATGTGAAGTCAGTAACCGATGTGAATGTAGAGGCTCCTCTGATAAACCGGGACCAAATCAGTTATCAGAATAGATCTGTTGATAGCAGTTACCTCTCCTGCATTGGTAATGTTACTGGTTTCATAGATGGTGATGTGGAGGTCAAATGGGCTACTGGTTTAACAACAAAGGTTGCACCTTATGAAATTTTCCGAATTGATAATAAGCATGAAGGTTCAACTGGAACTCCTGTTCCTTATGAAGCAAATGTTGAGGAGTTCTCTCAAGAGATGATTGAACATAGAAGTCTTCCATCAGACCAGAAGGGAAAGACCTTGTTAGATTGTAATGGCGATAGAGATAATTGTGAAAAGCATCCAGGAGAGAGTAGTTCCTCATCCCTTCCTCAAGCTGCCTTCGAACTGTTCTCCAGCATTAAAGCCAGCATACTCAAAACACTTACTGTAGCATCATTTTCGGGAAAATTCTCCCCAATCCCTAGGTTTGAAGAGGGAAATGAATCTAACTGTCTGGATAAGAAAGATTTGGACACTTGTCACCCTGACACTGAATCACATTTGGTGAGCAAGCTGCAGTCTTCTGAAGGCGTAACTCCGTATTCTGTAGTTATTGGGACTCCTGAGAAGAATGACTTCCCAGTTTCTTTAGACAACAAAAGTTCAGATCAGTTGAAGCAGTTTGATCTAATTGATAATTGTTCAGACCACTTTTTTTATGAGGGGAAAGGATTTTCGTTATCTCAGGTAAAAAAAGATTGGGTGAAGAAGGTACAACAAGAATGGAGCATCCTGGAAAAAAATCTCCCTGAAACTATTTATGTCCGTGTCTTTGAAGAAAGAATGGATCTCATGAGAGGAGCTATTGTCGGTGTGTCTGGGACACCATATCATGATGGATTGTTTTTCTTTGACATACATTTTCCTTCAGAGTATCCCAGCCAACCCCCAATGGTGCATTACATTTCTGGTGGACTACGATTAAATCCTAATTTGTATGAGTCTGGTAAAGTCTGTTTGAGTATCCTAAATACGTGGACTGGTACAGCTGCCGAAGTTTGGAACCCTGGAACTTCAACAATTCTTCAAGTCCTTCTTTCTCTTCAGGCCCTTGTCCTTAATGAGAAGCCTTATTTCAATGAAGCTGGATATGATCAACAAATTGGTAGAGCTGAAGGGGAGAGAAACTCAGTTAGTTACAATGAGAATGCTTTCCTTGTCACCTGCAAATCCATGTTGTATCTATTAAGAAAGCCTCCTAAGCATTTTGAGGCATTGGTGGAGGAGCACTTCAGACAACGTTCCAAACATATACTTCTGGCTTGTTCGGCATATCTTGAAGGAGCTCCTATTGGATGTGCTTTTGGTGGTGGAAATACTCGGAATGAAAACCCAAAGGGAACTTCTACTGGATTTAAGATCATGCTTGCTAAGCTCTTGCCCAAGCTCGTGGAGGCATTTTCTGACAAGGGAATTGATTGCAGCGAGTTCGCTGAGATGCAAAAGTAA 3033 0.4128 MVWYCPLPLQTHRFFLVTLGLDCLFIGVNRSVQTGQISFGILESLIDSCYPIRHKYPLKSALTYLLWITIAPVQCFCLLEKLMDAHITDLDWETSSDSSSSSEDQEDIDFEYGGQARSILSSLEESIGKIDDFLSFERAFVHGDVVCASSDPSGQMGRVTSVDVLVDLESVQGKKLKNVNSKKLTKIRSISEGDYVVKGPWIGQVQKVVDRVIILFDDGTKCEVITLEKDQLLPLTHNLLDDSQYPYYPGQRVKVKTSTASKPARWLCGTWKDSHGEGTVCAVEAGLVYVNWFASVLFGSNLNVNVPLCWQDSKNMTLLSCFSHTNWQLGDWCMLPPPVDQKEQMIQDASPCDPHNEHNKARGYKTKNLNSNIGELFIIEKIKTKVDIVWQNGEHTFGLDPLNLIPVNVINSHEFWPQQFVLEKGASDDPLKPSNQRWGVVLSMDAKEHTVKVQWRTAPTSETDNLTGDAMMETVSAYELLEHPDYSCCFGDIVFKAAQKQLGDHADKDNVKSVTDVNVEAPLINRDQISYQNRSVDSSYLSCIGNVTGFIDGDVEVKWATGLTTKVAPYEIFRIDNKHEGSTGTPVPYEANVEEFSQEMIEHRSLPSDQKGKTLLDCNGDRDNCEKHPGESSSSSLPQAAFELFSSIKASILKTLTVASFSGKFSPIPRFEEGNESNCLDKKDLDTCHPDTESHLVSKLQSSEGVTPYSVVIGTPEKNDFPVSLDNKSSDQLKQFDLIDNCSDHFFYEGKGFSLSQVKKDWVKKVQQEWSILEKNLPETIYVRVFEERMDLMRGAIVGVSGTPYHDGLFFFDIHFPSEYPSQPPMVHYISGGLRLNPNLYESGKVCLSILNTWTGTAAEVWNPGTSTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGERNSVSYNENAFLVTCKSMLYLLRKPPKHFEALVEEHFRQRSKHILLACSAYLEGAPIGCAFGGGNTRNENPKGTSTGFKIMLAKLLPKLVEAFSDKGIDCSEFAEMQK 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00413 1010 MobiDBLite consensus disorder prediction 604 636 - -
Phco11g00413 1010 CDD UBCc 763 916 IPR000608 -
Phco11g00413 1010 Gene3D Ubiquitin Conjugating Enzyme 725 1001 IPR016135 -
Phco11g00413 1010 Pfam Ubiquitin-conjugating enzyme 766 912 IPR000608 -
Phco11g00413 1010 MobiDBLite consensus disorder prediction 604 629 - -
Phco11g00413 1010 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 86 1002 - -
Phco11g00413 1010 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 761 921 IPR000608 -
Phco11g00413 1010 SUPERFAMILY UBC-like 754 930 IPR016135 -
Phco11g00413 1010 FunFam Probable ubiquitin-conjugating enzyme E2 23 724 999 - -
Phco11g00413 1010 SMART ubc_7 764 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00413 Phco-Chr11 2687778 2694042 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00413 11 2687778 2694042 Phco11g00413 11 2687778 2694042 ECH