Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00355 ATGTCTTCATATTTTCCAAGCTTTGGTACAAAAATCCCACGTACGGGGAAGGGGTGCGATGATGTCTTCACAGTGACCAAGACCAACCATTCAGTGAAGCAACCAGGTTCAAGCTCCAACTATAAAGTGCCCTGCAACCTCTCAAAGCAGCACATTGGTTTTGTGTCAAAATTCGACCAAATTTGTTCTTTTCCAGTGATGGAGGAGGAGCAGAAAAGGTTGGATGTTTTGCCTGAATTATCCGAGGAATATTCCAAGGAATTGGAGGTGGCTGTTAGAGCAGTGCAGATGGCGTGTTCCCTCTGCCAGAGAGTGCAGGACACTATAATTTCCAGCACTGGGTCTGGCACCAATCATCGCCAGGTGCAGTCCAAGGATGATAATTCTCCGGTTACAGTAGCAGATTGGAGTGTTCAAGCAATTGTCAGCTGGATGTTGTCAGAATGTTTAGGGAGTCAAAATGTCTCAATTGTTGCTGAAGAAGATGTTCAAAGTCTCTCCAAAGCTAATGCATCTGAACTGTTAGAAGCTGTGGTTGAAACTGTGAATCAATGTCTAGCTGAAGCACCTCGATTTGGAGTTCCGGAGCCAAAATGTGGTCTTTCAACTTCAGATGTTCTTGAAATCATTGGTCGCTGTAACTCAACCAGCGGTCCCACTGGAAGATTTTGGGTACTGGATCCTGTTGATGGAACATTAGGGTTTGTACGTGGAGATCAATATGCTGTAGCTCTAGCACTCATAGAGGATGGAGAAGTGAAGCTTGGTGTTCTTGGATGTCCTAACTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTATATCCAAGTTGACTCCATCAACTTCTGAAACTTGGAACAAAGGTTGTGTACTATATGCTAAAAGGGGTAGTGGGAAGGCCTGGATGCAACCGCTGCTCCATGTCAATAAGATGTTTATGTGGCCAAACCTTGCAAAACAAGTTTCTGTCTCTCCCATTGACAATCCTGCACTTGCCACCTTTTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCTTTTACTGCAGGACTGGCTCACACTATTGGTCTAAGGAAACAACCGTTGAGGGTATACAGCATGGTAAAGTATGCAGCAATAGCTCGTGGGGATGCCGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATACAGGAAGCTGGTGGGATGGTAACAGATGCAGGAGGACTTCCCCTAGACTTCTCAAAAGGCTTATATTTAGAAGGCCTTGATCGTGGCATAGTTGCTTGCTCTGGAGCCACACTACATGCAAAGATCATTGAAGCAGTTGATGCTAGCTGGGGCTCTTCTAGCCTTTGA 1395 0.4502 MSSYFPSFGTKIPRTGKGCDDVFTVTKTNHSVKQPGSSSNYKVPCNLSKQHIGFVSKFDQICSFPVMEEEQKRLDVLPELSEEYSKELEVAVRAVQMACSLCQRVQDTIISSTGSGTNHRQVQSKDDNSPVTVADWSVQAIVSWMLSECLGSQNVSIVAEEDVQSLSKANASELLEAVVETVNQCLAEAPRFGVPEPKCGLSTSDVLEIIGRCNSTSGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVKLGVLGCPNYPMRKEWLSYHHRYHRIISKLTPSTSETWNKGCVLYAKRGSGKAWMQPLLHVNKMFMWPNLAKQVSVSPIDNPALATFCEPVEKANSSHSFTAGLAHTIGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIQEAGGMVTDAGGLPLDFSKGLYLEGLDRGIVACSGATLHAKIIEAVDASWGSSSL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00355 464 CDD PAP_phosphatase 87 455 - -
Phco11g00355 464 Gene3D - 328 458 - -
Phco11g00355 464 ProSitePatterns Inositol monophosphatase family signature 1. 224 237 IPR020583 -
Phco11g00355 464 Gene3D - 82 317 - -
Phco11g00355 464 PANTHER PHOSPHATASE 77 462 - -
Phco11g00355 464 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 84 463 IPR006239 GO:0006790|GO:0008441
Phco11g00355 464 FunFam PAP-specific phosphatase HAL2-like 82 317 - -
Phco11g00355 464 FunFam PAP-specific phosphatase HAL2-like 328 461 - -
Phco11g00355 464 SUPERFAMILY Carbohydrate phosphatase 84 457 - -
Phco11g00355 464 ProSitePatterns Inositol monophosphatase family signature 2. 400 414 IPR020550 GO:0046854
Phco11g00355 464 PRINTS Inositol monophosphatase superfamily signature 224 240 IPR000760 -
Phco11g00355 464 PRINTS Inositol monophosphatase superfamily signature 397 421 IPR000760 -
Phco11g00355 464 Pfam Inositol monophosphatase family 127 458 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00355 Phco-Chr11 2291594 2295436 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00355 11 2291594 2295436 Phco11g00355 11 2291594 2295436 ECH
Phco4g02557 4 46824541 46827446 Phco11g00355 11 2291594 2295436 PCT